Streptomyces rochei: SRO_2320
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Entry
SRO_2320 CDS
T06265
Name
(GenBank) phosphodiesterase
Organism
srj
Streptomyces rochei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_4
PAS_3
PAS_9
PAS_8
Motif
Other DBs
NCBI-ProteinID:
BBC93496
LinkDB
All DBs
Position
complement(2639101..2642454)
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AA seq
1117 aa
AA seq
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MSAPTPTTTVHAEVRAPHPHQDPPARGRVRVGRTRASEQLVLALVCAAYAVGAAFDWGTD
EIALVMGDFGLSAAAGVAAVSCFLYARGLRIRYRPAWLLFGLSSAMAALGNAVWGWYEVV
LGRPVPSPSYADLFFLCFAPPAIVGLLVLASRPVTRAGWICLGLDAWLIGGSLLTLSWSL
ALAQAARFDGPSVAHTALSLAYPLLDIALVSMVLALHFRRAPGNRTAVNTAIGALALTVM
CDALFTSPLLHSNYRSGQLLDAGWFAGSLLLAYAPWATPRPGTAPAPDGPTRAASGHLPA
PRAAGHRSPSAPDPSAPGPSAEHSRDPGSGQDAGSGHDVHTGAERDAYDGSEHGAYPDPE
PSHFQATGDSAFPGAEHGPLPAPDRTDPAPHAGADSARYPAGRPITGSLAALTPYLAAAV
CTLGILYNVLNGRRPDHVVLITAGCVVLALVIRQGIMLLDNIALTQELAQKENHFRSLVQ
GSSDVIMIAAPNGILRYVSPAAAGVYGRPAEDLVGTELAALIHPEDLGCVVHEVRRFLAA
SPLTEPTTRIECRFRSGGGSGWLNVESTVNRHHGGLIFNSRDVTERVRLQAQLQHNAEHD
PLTDLPNRALFTRRVQQALSGRRATDRGAALRGTAVLFIDLDGFKAVNDTIGHQAGDELL
VQAARRLQDAVRQGDTASRLGGDEFAALIVGDGTHDRAARERNILELADRLRMTLSQPYA
IDGNDVRVNASIGVAFAEPGLGAGELLRNADLAMYRAKSAGKGRVELYKPQMQQDVVRKA
ELATRLRAALHDGGFALLHQPVVCLEDGRITAVSAQARWRSSQGVLFTPAEFLRVAEDGD
KTAELDRWILQEAVAGAAERAASGLVVPVAVRMSARRLLDRSLPPGSVEALLTRYGLPPG
ALVIELSDTDPGLGLDELERRLTALSRLGVRIALDGFGSGHAAIAALRRLPVDILKLDRG
LVEGVVDSARLHKITSGLLRISGDLGLQSVAEGVDLPEQAVALRAMGCTHGIGAAFSGPL
DEYRLRRALGAGSCPVPHSGTGAHATAGAHASGGAHAGTGPRTSSGPLVPAEPAFAGRVR
ETQGRLGAAGVYTGGVPAVFGGSSALRSHSETPVPPT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcccacgccgaccaccaccgtccacgcagaggtgcgcgcgccgcacccgcac
caggacccgccggcgcgcggacgggtccgcgtcgggcgcacccgcgcctccgaacagctt
gtcctcgcccttgtgtgcgcggcgtacgccgtcggcgccgcgttcgactggggcacggac
gagatcgcgctggtcatgggcgacttcgggctcagcgccgcggccggtgtcgcggccgtc
tcctgcttcctctacgcccgcggcctccggatccgctaccgcccggcctggctgctcttc
ggcctctcctcggccatggcggccctgggcaacgccgtctggggctggtacgaggtcgtg
ctcggccggcccgtgcccagcccgtcgtacgccgatctgttcttcctgtgcttcgcgccg
cccgcgatcgtgggcctgctggtgctcgccagccgtccggtgacccgggccggctggatc
tgtctgggcctggacgcctggctgatcggcggttcgctgctcaccctgtcatggagcctc
gcgctcgcccaggcggcccggttcgacgggccgagcgtggcgcacaccgcgctgtcgctg
gcgtatccgctgctggacatcgcgctggtcagcatggtgctcgcgctgcacttccggcgc
gcgcccggcaatcgcaccgccgtgaacaccgcgatcggcgcgctcgccctgaccgtgatg
tgcgacgcgctgttcacctcgccgctgctgcacagcaattaccgctccgggcagctgctg
gacgcgggctggttcgccggttcgctgctgctcgcctacgccccctgggccacaccccgg
cccgggaccgcgccggcgccggacgggcccacccgcgcggcctccgggcacctgcccgcg
ccgcgcgccgccggccatcggtcaccgtccgcgcccgacccctccgcgcccggcccgagt
gccgagcacagccgggacccgggctccgggcaggacgcgggatccgggcacgacgtgcac
acgggggccgaacgcgacgcgtacgacggctccgaacacggcgcgtacccggacccggaa
ccgagccacttccaggccaccggggacagcgcgttcccgggcgccgagcacgggccgctc
ccggcacccgaccgcaccgacccggctccgcacgccggtgccgactccgcccgctacccg
gccggccgcccgatcaccggctcgctcgccgcgctcaccccgtatctcgccgccgcggtg
tgcaccctgggcatcctgtacaacgtcctgaacggccgcaggcccgaccacgtcgtgctg
atcaccgcgggctgcgtcgtgctcgcgctcgtgatccgccagggcatcatgctgctggac
aacatcgccctcacccaggaactggcccagaaggagaaccacttccgctccctggtgcag
ggctccagcgacgtcatcatgatcgccgcgcccaacggcatcctgcgctacgtctccccg
gccgccgccggggtctacggccgtcccgccgaggacctggtgggcaccgagctggccgcc
ctgatccaccccgaggacctgggctgcgtggtgcacgaggtgcgccgcttcctcgcggcc
agcccgctgacggagcccaccacccgtatcgagtgccgcttccgctccggcggcgggagc
ggctggctgaatgtcgagtccaccgtcaaccgccaccacggcggcctgatcttcaacagc
cgggacgtcaccgaacgcgtgcgcctccaggcgcagttgcagcacaacgcggagcacgac
ccgctgaccgacctgcccaaccgcgcgctgttcacccggcgcgtccagcaggccctgtcc
ggtcgccgggccaccgaccggggcgccgccctgcgcggcaccgcggtgctcttcatcgac
ctcgacggcttcaaggccgtcaacgacaccatcgggcaccaggccggcgacgaactcctc
gtccaggccgcccgaagactccaggacgcggtccgccagggcgacaccgcctcccggctc
ggcggcgacgagttcgcggccctgatcgtcggggacggcacccatgaccgtgccgctcgt
gagcgcaacatcctggagctcgcggaccgcctcaggatgaccctctcccagccctacgcg
atcgacggcaacgatgtccgggtcaacgcctccatcggcgtcgccttcgccgaacccggc
ctcggggcgggcgagttgctgcgcaatgccgacctcgcgatgtaccgcgcgaaatcggcc
ggaaagggccgggtcgagctgtacaagccgcagatgcagcaggacgtcgtacgcaaggcg
gagctggccacccggctgcgcgccgcgctgcacgacggggggttcgcgctgctgcaccag
cccgtggtgtgcctggaggacggccggatcacggcggtctcggcgcaggcccgctggcgg
tcctcgcagggggtgctgttcaccccggccgagttcctgcgggtggccgaggacggcgac
aagacggccgagctggaccgctggatcctccaggaggccgtggcgggggccgccgagcgg
gccgcgagcgggctcgtcgtgccggtggcggtgcggatgagcgcccggcggctgctggac
cgctcgctgccgcccgggtccgtggaggcgctgctgaccagatacgggctgccgcccggg
gcgctggtcatcgagctgtccgacaccgatccggggctcggtctcgacgagctggagcgg
cggctgaccgcgctgagccggctcggggtgcggatcgcgctggacggcttcggcagcggc
catgcggcgatcgccgcgctgcggcggctgcccgtggacatcctcaagctcgaccgcggc
ctcgtcgagggcgtggtggactccgcgcggctgcacaagatcaccagcgggctgctgcgg
atctcgggcgatctcgggctccagtccgtcgccgagggcgtggacctgcccgagcaggcg
gtggcgctgcgcgcgatgggctgcacccatggcatcggcgcggcgttctccggcccgttg
gacgagtaccggctgcgccgggcgctcggcgccgggtcctgcccggtgccgcacagcgga
acgggagcgcacgcgacggccggggcgcacgcctcgggcggagcccacgccgggaccggc
ccgcgcacatcgagcgggccccttgtaccggccgaaccggcgttcgcgggcagagtgcgg
gaaacacaggggcggctgggtgccgcgggggtgtacaccggaggagtacccgctgttttc
ggaggcagcagtgcccttcgctcacattctgagacgcccgtcccacccacttga
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