Streptomyces rochei: SRO_5005
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Entry
SRO_5005 CDS
T06265
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
srj
Streptomyces rochei
Pathway
srj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SRO_5005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srj02000
]
SRO_5005
Transporters [BR:
srj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SRO_5005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_22
DUF4199
AAA
AAA_23
RsgA_GTPase
EMC3_TMCO1
TsaE
MMR_HSR1
AAA_30
nSTAND3
AAA_29
AAA_33
DUF87
Zeta_toxin
AAA_28
DO-GTPase2
AAA_21
SRP54
NACHT
AAA_7
NTPase_1
NB-ARC
AAA_25
AAA_18
cobW
Motif
Other DBs
NCBI-ProteinID:
BBC96181
LinkDB
All DBs
Position
complement(5513313..5515241)
Genome browser
AA seq
642 aa
AA seq
DB search
MSGPMGRMMAGGGPDQRSMDFKGSGKRLLAQFKPERLTVYGLLVCVVVSVALSVIGPKIL
GRATDLVFSGIIGRQMPAGATKAQVLEQMRAHGKGAVADMLQSTDFTPGKGIDFGAVGDV
LLLALITFTVAGLLMAVATRLVNRSVNRTMYRLRESVQTKLSRLPLSYFDKRQRGEVLSR
ATNDIDNIGQTLQQSMGQLINSVLTIVGVLAMMFWVSWILALVALVTVPLSFFVATRVGK
RSQPHFVQQWRSTGKLNAHVEEMYTGHTLVKVFGRQEESAKQFAEQNEALYEAAFKAQFN
SGVMQPLMMFVSNLNYVLVAVVGGLRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANL
VQSGVASAERVFELLDAEEQEADPVPGERPAELRGRVRLEHVSFRYDPEKPLIEDLSLTV
EPGHTVAIVGPTGAGKTTLVNLLMRFYDVSGGRITLDGVDVRKMTRDELRSGIGMVLQDT
WLFGGTIAENIAYGASREVTRGEIEEAARAAHADRFIRTLPEGYDTVIDDEGTGVSAGEK
QLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMAKLAAGRTSFVIAHRLSTIRDAD
TILVMENGSIVEQGAHTELLAADGAYARLYKAQFAQAVAEVD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcccatgggacgcatgatggccgggggcggccccgaccagcggtcgatggac
ttcaaggggtcgggcaaacgactgctcgcccagttcaagcccgaacggctcaccgtgtac
ggcctgctggtctgcgtggtggtcagcgtggccctcagcgtgatcggcccgaagatcctc
ggccgcgccaccgacctggtcttctccggcatcatcggccggcagatgcccgccggggcc
accaaggcgcaggtgctggagcagatgcgggcgcacggcaagggtgccgtcgcggacatg
ctccagagcaccgacttcaccccgggcaagggcatcgacttcggcgcggtcggcgacgta
ctgctgctcgcgctcatcaccttcacggtcgccgggctgctgatggccgtggcgacgcgg
ctggtcaaccggtcggtgaaccgcaccatgtaccggctgcgcgagtccgtgcagacgaag
ctgtcccggctgccgctgtcgtacttcgacaagcgccagcgcggcgaggtgctctcgcgt
gcgaccaacgacatcgacaacatcgggcagacgctccagcagtcgatgggccagctgatc
aactcggtgctgaccatcgtcggtgtgctggcgatgatgttctgggtctcctggatcctc
gcgctggtcgcgctggtcacggtgccgctgtcgttcttcgtcgccacccgggtcggcaag
cgttcgcagccgcacttcgtgcagcagtggcgctccacgggcaagctcaacgcccatgtg
gaggagatgtacaccgggcacacgctggtgaaggtgttcgggcggcaggaggagtcggcg
aagcagttcgcggagcagaacgaggcgctgtacgaggcggcgttcaaggcgcagttcaac
agcggtgtgatgcagccgctgatgatgttcgtgtcgaacctgaactatgtgctggtggcg
gtcgtcggtggcctgcgggtcgcgtccggcgcgctgtccatcggtgatgtgcaggcgttc
atccagtactcgcggcagttctccatgccgctgacgcaggtggcctccatggcgaacctg
gtgcagtccggtgtggcctcggcggagcgggtcttcgaactcctggacgccgaggagcag
gaggcggacccggtaccgggcgagcggcccgcggaactgcgcgggcgggtgcgccttgag
catgtgtccttccggtacgacccggagaagccgctgatcgaggacctctcgctcacggtg
gagcccggccatacggtggccatcgttggccccacgggggcgggcaagaccacgctggtc
aacctgctcatgcggttctacgacgtctccggcgggcggatcaccctggacggggtggac
gtacggaagatgacccgggacgagctgcggtccgggatcggcatggtgctccaggacacc
tggctgttcggcggcaccatcgcggagaacatcgcgtacggcgcctcgcgggaggtcacc
cggggcgagatcgaggaggccgcgcgggccgcgcacgccgaccggttcatccggacgctg
cccgagggctacgacacggtgatcgacgacgagggcacgggggtgagcgccggtgagaag
cagctcatcaccatcgcgcgggcgttcctgtccgacccggtgatcctggttctggacgag
gcgacgagttccgtggacacgcggaccgaggtgctgatccagaaggccatggccaaactc
gccgccgggcgtacgtcgttcgtgatcgcgcaccggttgtcgaccatccgggacgcggac
acgatcctcgtcatggagaacggctccatcgtcgaacaaggggcgcacaccgagctgttg
gcggcggacggggcgtatgcccggctgtacaaggcccagttcgcacaggcggtcgccgag
gtggactag
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