Streptomyces rochei: SRO_6167
Help
Entry
SRO_6167 CDS
T06265
Name
(GenBank) type I polyketide synthase
Organism
srj
Streptomyces rochei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Acyl_transf_1
ACPS
PS-DH
KAsynt_C_assoc
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
BBC97343
LinkDB
All DBs
Position
6752149..6757164
Genome browser
AA seq
1671 aa
AA seq
DB search
MTNSQLPVAIVGMAVLLPGARGLDAYWHNLRSGVDAIGEVPAGRWDADYYRPAAAGAAAP
DQVYCRRGGFVDSLAEVEVTRYGIMPAAVCGTEPDQLIALDVAAAALADAGGERGLPARD
RIGVILGRGGYLTPGLARLDQRVRTAGQLVRTLGELVPDLSPVQLDRVRAAFTERLGPDR
PEAAIGLVPNLAASRIANRLDLRGPAYTVDAACASSLVAVDQAVGELSAGRCDMMLAGGV
HHCHDITLWSVFAQLRALSPTERIRPFHRDADGILIGEGTGVVVLKRFADAERDGDRVYA
VIRGTGVAGDGRTAGLVSPDPGGQTRAVRQAWRAAGLDPAAPRSIGLLEAHGTATPAGDR
AELTTLAEVFGPGSGLADEERPVLGSVKSMIGHTMPAAGVAGLVKAALALHHATLLPTLH
CDDPHPRLAATRFRTLAQARPWDRDPGEPTRRAAVNAFGFGGINAHVVLEEAPAARRATA
PWHPPAPAPVARVAEPERVLLLAADSVERLAALLDADDSTVLAAGLDPARAHPGAGPARL
GIVAPNTRRLALARRAAEKGRAWQGRGDVWLRPTPLLGGPADRLAFVFPGLEGDFTPPRT
DDIAAHFGLPAPQDTRAETGVGARAGSRVEDVGRHGLDVVGVGRLLDRALRAMGVVPDAV
AGHSVGEWTAMAAAGIYSPGQVDGFMAEFDPDALTVPGLAFAAIGTSAAQVEAALADAWA
GSGIVLSHDNAPRQSMVCGPDSAVEDLVRSFRAQGVICQVLPFRSGFHTPMLEPYLAPIQ
EAADRFRLHPPTVPVWSGTTARPFPAAESAVRALFVRHLLEPVRFRELTEALYAAGHRVF
VQPGPGRLTSLIDDTLGDRDHLAVPACSPHHDGLPQLRRVATALWAAGAAVVPALTGTPA
AMPTSATRPTPAAPAILVNPAGVDRPPVRLDLGGALVSLDGAVLEELRGELGRRGSPVPR
PVASSAPTAGELAASGAPTVGGFAALGAPAPGGLAAPRSHTVDGLAAPGSPALDGLAARF
PVAAELSALLRDTADTAAEVMAAAEGRTPAVRPRTPTANPRPPHATPPAPAVSAVATRAS
AVPAAVLPPSAAPAVATRASVVPAAVPPAPAVSAVATRAPATPTTSAPESSTTTTLHISP
RTMPHLLDHCFYPQRPGWPDLEDRWPVVPATTIVRHMMDAAEAAEPGMRAVAVHGARFER
WLTAVPAVDVPITVTPVPGRPHHLAVSFGPTARAVLELAPHHPAPPPPMPRPDDPERRPE
HTAAQIYRERWMFHGPGFQGLTELSAIGERHVRGVITAAAAPGALLDNVGQLLGYWIMAT
RTERTVVFPVQMRRMTFHGPHPAPGTPVDCLVRITTLTDTLLEADAQLTVGGRVWAVLDG
WQDRRFDNDPTTRPVERFPERHTLSAVQPGGWTLLHERWPDLASRELIMRNSLGSVERAQ
YAAHPPRGRRQWLLGRIAVKDAVRRWLWEQGEGPVFPAEIRVHNDEAGRPRVTGAHGRTL
PPLDVSLAHRAEAGVALVRPRRPHPGPGSTDGVGVGIDIEEVVARESATLATALGPAELR
LLRAQSGPEAEWFARFWAAKEAVAKAEGTGFGGRPRDFRVLEAAPDGSRLLVSGRLADAY
PVHCAQAANPPALAPRAYVVAWTTGPATASTTRPTFEAAAPHDPAAEETPR
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagtcaactgcccgtcgccatcgtcggaatggcggtgctgctgccgggcgcg
cgcggactcgacgcctactggcacaacctgcgcagcggcgtcgacgcgatcggcgaggtg
cccgcgggccgctgggacgccgactactaccgcccggccgccgccggggccgccgccccc
gaccaggtgtactgccggcgcggcggcttcgtggacagcctggccgaggtggaggtcacc
cggtacggcatcatgcccgccgccgtctgcggaaccgagcccgaccagctgatcgccctc
gacgtggccgccgccgcgctcgccgacgcgggtggcgagcgcgggctgccggcccgggac
cggatcggggtgatcctgggccggggcggctacctcacccccgggctggcccggctggac
cagcgggtccgcacggccggccaactcgtgcgcacactcggtgagttggtgccggatctg
tcgcccgtccaactcgaccgggtccgggcggcgttcaccgagcggctcggcccggaccgc
cccgaagccgcgatcggcctggtgcccaacctggccgcctcccggatcgccaaccggctc
gatctgcgcggccccgcctacaccgtcgacgcggcctgcgcctcctcgctggtcgccgtc
gaccaggcggtcggcgaactcagcgccgggcgctgcgacatgatgctggccgggggagtg
caccactgccacgacatcaccctgtggagcgtcttcgcccagctgcgcgccctgtccccg
accgagcgcatccggcccttccaccgggacgccgacggcatcctcatcggcgagggcacc
ggcgtcgtcgtactgaagcggttcgcggacgccgaacgcgacggcgaccgggtctacgcc
gtgatccggggcaccggtgtcgcaggtgacggccgtacggcgggactcgtcagccccgac
ccgggcggccagacccgggccgtgcgccaggcctggcgggccgccgggctcgaccccgcg
gcgccccgctccatcggcctgctggaggcccacggcacggccacccccgccggtgaccgc
gccgaactcaccacgctcgccgaggtgttcggacccggctcgggcctcgccgacgaggag
cgcccggtcctcggctcggtgaagtccatgatcggccacacgatgccggccgccggggtc
gcgggcctggtcaaggccgccctcgccctccatcacgccactctgctgcccaccctgcac
tgcgacgacccccatccccgtctcgccgccacccgcttccgcaccctggcacaggcccgc
ccctgggaccgggacccgggcgagccgacccgccgggccgccgtcaacgccttcggcttc
ggcgggatcaacgcccatgtggtgctggaggaggcaccggccgcccgacgagccaccgcc
ccctggcacccgcccgcccccgccccggtcgcgcgcgtcgccgaacccgagcgcgtcctg
ctgctcgcggccgactccgtcgaacgcctcgccgcgctgctggacgccgacgactccacc
gtcctggccgccgggctcgatccggcccgcgcgcatcccggcgcgggaccggccaggctc
gggatcgtcgcaccgaacaccagacggctcgcgctcgcccgccgggccgccgagaagggc
cgggcctggcaggggcgcggcgatgtatggctgcggcccaccccgctgctcggcggcccc
gccgaccggctggcgttcgtcttccctggtctggagggcgacttcacaccgccgcgcacc
gatgacatcgccgcccacttcggcctgcccgcgccgcaggacacccgggcggagaccggg
gtgggcgcgcgggcgggcagccgggtcgaggacgtcgggcggcacgggctcgatgtcgtc
ggcgtgggccggctgctggaccgggcgctgcgcgcgatgggcgttgtaccggacgcggtc
gccgggcacagcgtcggcgagtggacggccatggcggccgccgggatctactcacccggc
caagtggacggtttcatggccgagttcgaccccgacgcgctgaccgtccccgggctcgcc
ttcgccgcgatcggcacctccgccgcacaggtcgaagcggcgctcgccgacgcctgggcg
ggctccgggatcgtgctctcccatgacaacgcgccccgccagtcgatggtctgcggaccg
gactcggcggtcgaggacctcgtacggtccttccgcgcgcagggcgtgatctgccaggtg
ctgcccttccgctccggcttccacacgccgatgctcgaaccgtatctcgcccccatccaa
gaggccgccgaccgcttccggctgcacccgccgaccgtcccggtgtggtccggcacgacc
gcgcgacccttcccggcggccgagtcggccgtgcgcgcgctgttcgtacggcacctgctg
gaaccggtgcgcttccgcgagctgaccgaggccctctacgccgccggacaccgcgtcttc
gtccagcccggccccggccgtctcacctccctgatcgacgacaccctcggcgaccgcgac
cacctcgcggtccccgcgtgctcgccccaccacgacgggctgccgcaactccgacgcgtg
gcaacggcgttgtgggcggcgggagcggcggtggtgccggccctcacggggacgccggcg
gcgatgccgacatctgcgacgcggccgacacccgcggcgcccgcgatcctggtgaacccc
gcgggtgtcgaccgcccgcccgtccgactcgacctcggcggcgcgctggtgtcgctggac
ggtgccgtactcgaagaactgaggggggagttggggcggcgggggtccccggtgccacgt
ccggtcgcgtcgagcgcgcccaccgccggcgagctcgcggcctcgggcgcacccacggtc
ggcggcttcgctgccctgggcgcaccagcccccggggggctcgccgccccgcgctcacac
accgtcgacgggctcgccgctccgggctcaccggccctcgacggacttgccgcccgcttc
ccggtcgccgccgaactgtccgcgctgctgcgggacaccgcggacacggcggccgaggtg
atggcggcggcggagggccgtactccggccgtacggcctcgcaccccgaccgcgaacccg
cgcccgccccacgcgacgccacccgcccccgccgtatccgcggtcgcgacgcgcgcctcc
gctgtcccggcggccgtgctaccgccctccgccgcccccgcggtcgcgacgcgcgcctcc
gttgtccccgcggccgtgccaccggcgcccgccgtatccgccgtcgcgacgcgcgccccg
gccacccccacgacctcagccccggaaagctccacgactaccacgctccacatctccccc
cggaccatgccccacctcctcgaccactgcttctatccgcagcgccccggttggccggat
ctggaggaccgctggccggtggtgcccgcgaccacgatcgtgcggcacatgatggacgcg
gcggaggcggccgagcccgggatgcgggcggtggccgtgcacggggcccggttcgagcgg
tggctgaccgccgtgcccgccgtggacgtaccgatcacggtcaccccggtccccgggcgg
ccgcaccacctcgccgtctccttcgggcccaccgcccgcgccgtgctcgaactcgccccg
caccacccggcaccacccccaccgatgccccgcccggacgaccccgagcggcgccccgag
cacaccgccgcacagatctaccgcgagcgctggatgttccacggcccggggttccagggc
ctgaccgagctgtccgcgatcggcgagcggcatgtgcgcggggtgatcaccgcggccgcc
gcccccggcgcgctgctggacaacgtgggccagctgctcggctactggatcatggcgacc
cgcaccgagcggaccgtcgtcttccccgtgcagatgcgccggatgacgttccacgggccg
catccggcgcccggcacccccgtcgactgcctggtgcggatcaccaccctcaccgacacc
ctcctcgaagccgacgcccagctcaccgtcggcggccgggtgtgggccgtgctcgacggc
tggcaggaccgccgcttcgacaacgacccgacgacccggcccgtcgaacgcttccccgag
cgccacaccctgtccgccgtccagcccggcggctggacgctgctgcacgagcgctggccc
gacctcgcctcccgcgagctgatcatgcgcaactcgctgggcagcgtcgagcgcgcgcag
tacgccgcccatccgccccggggccgccgccagtggctgctcggccggatcgccgtcaag
gacgcggtacgccgatggctctgggagcagggcgaggggcccgtcttcccggccgagatc
cgggttcacaacgacgaggccgggcgcccccgcgtcaccggtgcccacggccggaccctg
cccccgctggacgtctccctcgcacaccgggccgaggcgggcgtggcgctcgtacggccg
cgccgcccgcaccccggccccggcagcaccgacggcgtcggtgtcggcatcgacatcgag
gaggtcgtcgcacgcgagagcgcgacgctcgccacggcgctcggaccggcggaactccgg
ctgctccgggcgcagtcgggcccggaggcggagtggttcgcccgcttctgggccgccaag
gaagccgtcgccaaggccgagggcaccggattcggcggccggccaagggacttcagggtc
ctggaggccgcccccgacggcagccgactgctcgtctccggccggctcgccgacgcctac
ccggtccactgcgcccaggcggccaacccgcccgccctggcgccccgcgcgtacgtggtg
gcctggaccaccgggcccgccaccgcgtccaccacccggcccaccttcgaagccgccgca
ccccacgatcccgcagccgaggagaccccccgatga
DBGET
integrated database retrieval system
