Serratia plymuthica 4Rx13: SOD_c06910
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Entry
SOD_c06910 CDS
T02710
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c06910 (truD)
Enzymes [BR:
srl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SOD_c06910 (truD)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOD_c06910 (truD)
Prokaryotic type
SOD_c06910 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGO53698
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All DBs
Position
769851..770897
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AA seq
348 aa
AA seq
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MDMANLTWLHGQPQSTGVLKASPEDFVVVEDLGFEPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHLPGKETPDFSQFSLEGCEVLASARHLRKM
RIGTLKGNAFTLVLRQISDRQDVEQRLQVIAAGGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIASRRLANQQHRTVLEGDALQLTGRGSWFVAKPDEL
AELQQRLDAGELLITAPLPGDGEPGTAGEALNVEQQCLAEQPELMALLKRERVDPARRAL
LLQPQKMQWNWWDDATVELRFWLPAGSFATSVVREIMRQESNDADISE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggctaatttgacctggctgcacggccagccgcaaagcacaggcgtgctgaaa
gccagcccggaagatttcgtggtggtggaggatctgggctttgagccggacggagaaggc
gaacatgtactggtgaacatccgcaagaacggatgtaacacccagtttgtcgccgattat
ctggcgcgtttcgccggcattcacgcccgttcggtcagctacgccggcctgaaagatcgc
catgcggtgaccgaacaatggttctgcctgcatctgccgggcaaagaaacgcctgatttc
agccaattctcgctggagggctgcgaagtgctggccagtgcccgccatctgcgaaaaatg
cgcatcggtacgctgaaaggcaatgcttttactctggtgctgcgtcagatctccgatcga
caggatgtggaacagcgcctgcaggtcattgcggcgggtggcgtgccgaactatttcggc
agccagcgttttggtcgcggtggcaataacctggtcatggcgcgtcgctgggcgaatgat
gagatccgggttaaagaacgcagcaagcgcagtttttatctttccgccagccgcagcgcg
ctgtttaacctgatcgccagccgacgcttggccaatcaacagcaccgcacggtgctggaa
ggggatgcgctgcaacttaccggccgcggcagttggtttgtcgccaaaccggacgaactg
gctgagttgcagcagcggctggatgccggtgagctgttgattaccgcaccgttgccgggc
gacggcgaaccgggcaccgccggggaagcgctgaacgttgaacaacaatgtttggcggaa
cagccggagctgatggcgttgttaaagcgggaacgcgttgatccggctcgtcgcgcattg
ttgctgcagccgcaaaagatgcagtggaattggtgggacgatgccaccgttgaattgcgt
ttttggctgccggccggcagttttgccaccagcgtggtgcgcgaaatcatgcggcaagag
agcaatgacgcggacattagcgagtaa
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