Serratia plymuthica 4Rx13: SOD_c12510
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Entry
SOD_c12510 CDS
T02710
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00470
D-Amino acid metabolism
srl00550
Peptidoglycan biosynthesis
srl01100
Metabolic pathways
srl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOD_c12510 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOD_c12510 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SOD_c12510 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c12510 (ddlA)
Enzymes [BR:
srl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SOD_c12510 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Precursor biosynthesis
Amino acid ligase
SOD_c12510 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
AGO54236
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All DBs
Position
1370886..1371989
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AA seq
367 aa
AA seq
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MTKLRVGVIFGGKSAEHEVSLQSAKNIVDAIDKEKFDVTLLGIDKQGQWHINDASNYLLN
AENPALIALNRSNKNVALIPGQEKQQLIEASSAGALGQLDVVFPIVHGTLGEDGSLQGLL
RMANMPFVGAGVLGSAVSMDKDVTKRLLRDAGLAVAPFVTLTRTNRGKYGFDQLSERLGL
PLFIKPANQGSSVGVSKVQDRAGFDAALALAFSFDHKVLVESAIVGREIECAVLGNDEPQ
ASLCGEIVLSDAFYSYDTKYINEQGAKVVVPAEIAPEVSDKIRDVALKAFRALECFGLAR
VDVFLTPDNNVVINEINTLPGFTNISMYPKLWAASGVSYSELITRLIELALERHQQDRAL
NSSVFDR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaattacgggttggggtgatctttggcggtaaatcggctgagcatgaagtgtcg
ctgcagtcggcaaaaaacattgtggacgctatcgacaaagagaagtttgacgtcacgttg
ctggggatcgacaagcaggggcaatggcacattaacgatgcctccaattacctgctgaat
gcggaaaacccggcgctgatcgcgctgaaccgctcaaataaaaatgtggcgctgatcccc
ggtcaggagaaacagcaactgattgaggcgagcagcgccggcgcactgggccagctcgac
gtggtattcccgatcgtgcatggcacgctgggcgaggacggttcactgcaagggttgttg
cggatggccaatatgccgttcgtcggcgccggtgtgttgggctcggcggtgagcatggac
aaagacgtcaccaaacgcctgctgcgcgatgccgggctggcggtggccccctttgtcaca
ctgacgcgcaccaaccgcggcaaatacggtttcgatcagcttagcgagcgtctgggcctg
ccgttgtttatcaaaccggctaaccagggctcttcggtgggcgtcagcaaggtgcaggat
cgggccggctttgacgcagcgctggcgctggcgttcagcttcgatcacaaggtgctggtg
gagtcggcgattgtcggccgtgagattgagtgcgcggtgttgggcaatgacgaaccgcag
gccagcttgtgcggtgaaatcgtgctgagcgatgctttttactcctacgacaccaaatac
atcaatgagcagggcgcgaaggtagtggtgcctgcggagatcgcgccggaagtcagcgac
aagatccgcgacgtggcgctaaaagcgttccgggcgctggaatgctttggcctggcgcgc
gttgacgtgttcctgacgccggacaacaacgtggtgattaacgaaatcaacacgctgccg
ggtttcaccaatatcagcatgtaccccaaactgtgggccgccagcggcgtcagctacagc
gagctgattacccggttgatcgagctggcgctggagcgccatcagcaagatcgcgcgctg
aacagctcggtgttcgatcggtaa
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