Serratia plymuthica 4Rx13: SOD_c25860
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Entry
SOD_c25860 CDS
T02710
Symbol
dadX
Name
(GenBank) alanine racemase, catabolic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00470
D-Amino acid metabolism
srl01100
Metabolic pathways
srl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOD_c25860 (dadX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SOD_c25860 (dadX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c25860 (dadX)
Enzymes [BR:
srl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SOD_c25860 (dadX)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Precursor biosynthesis
Racemase
SOD_c25860 (dadX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AGO55559
LinkDB
All DBs
Position
complement(2904338..2905411)
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AA seq
357 aa
AA seq
DB search
MPRPITATLHLSAFENNLQVIRRFAPSAKIWSVVKANAYGHGIKHVWRSLGQTDGFALLD
LAEAILLRESGWQGPILLLEGFFKPQDLLLLDRYRLTTSVHSDWQLAAIAAAKLSAPLDV
YLKVNSGMNRLGFSPDRLHSVWLQAREMGNIASLTLMSHFATADGPQGVAEQMTVIEGAA
AGIPLPRCLANSAATLWHPQTHGSWVRPGIVLYGASPSGQWRDIADSGLQATMTLSSEII
GVQALKSGDRVGYGWRYSAKAAQRIGVVACGYADGYPRHAPSGTPVWVDGVLTHTVGTVS
MDMLAVDLTHCPGADIGAEVELWGRRLPVDDVAAAAGTLGYELLTALAARVPVTVEA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcccgattaccgccacgctgcatctttccgcttttgaaaataacctgcaggtg
attcgccgtttcgcccccagcgccaaaatttggtcggtagtaaaagccaatgcttatggc
cacggaatcaaacatgtctggcgtagcctggggcaaaccgacggtttcgccttgctggat
ctcgccgaggccattttactgcgagagtccggttggcaagggccgattctgctgctggaa
ggttttttcaagccacaagatttgctcctgctcgaccgctatcgtttaactacctcggta
cacagcgactggcaactggcagcgatagcggcagccaaactgtccgcgccgctggatgtt
tatctgaaagtgaacagcgggatgaatcgcctgggcttttccccggatcgtttgcacagc
gtttggttgcaagcgcgggagatgggcaatatcgccagcctgacgctgatgagccacttt
gccaccgccgacggcccacagggcgtggcagagcaaatgactgtcattgagggtgcggcg
gctggaatccctttgccgcgctgcctggcgaactccgccgccacgttgtggcatccgcaa
acccacggcagttgggtgcggccaggcatagtgctgtatggcgcatcgccaagcggccag
tggcgtgatatcgccgacagcggcttgcaggctaccatgacgttaagtagcgaaatcatt
ggcgttcaggcgctgaaaagtggtgatcgtgtcggttatggctggcgttacagcgccaag
gctgcgcagcgtatcggcgtagtggcctgcggttatgcggacggttatcctcgccatgcg
ccgagcggcacgccggtttgggtagatggcgtgttgacgcatacggtgggcacggtctcc
atggatatgctggcggttgatctgacgcactgtcctggcgctgacattggtgcggaagtg
gaattgtgggggcggcgcctgccggttgacgatgtcgccgcagcggcaggcacgctgggt
tatgagttgctgacggcgctggccgcgagagtgccagtcaccgtcgaggcgtaa
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