Serratia plymuthica 4Rx13: SOD_c42590
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Entry
SOD_c42590 CDS
T02710
Symbol
alr
Name
(GenBank) alanine racemase Alr
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00470
D-Amino acid metabolism
srl01100
Metabolic pathways
srl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOD_c42590 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SOD_c42590 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c42590 (alr)
Enzymes [BR:
srl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SOD_c42590 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Precursor biosynthesis
Racemase
SOD_c42590 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AGO57208
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All DBs
Position
complement(4798950..4800029)
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AA seq
359 aa
AA seq
DB search
MKAATAVIDRRALRHNLQQVRRQAPQSRLIAVVKANAYGHGLLETAHTLQDADCYGVARI
GEALMLRSGGIVKPILLLEGFFCAEDLPVLVANNIETAVHSIEQLEALEQTELARPVPVW
MKLDTGMHRLGVRPEQAEAFYQRLSACRNVAQPVNIMSHFSRADEPDSDATLKQMQCFES
FVRGKPGQRSIAASGGTLLWPDAHNDWVRPGIILYGVSPMEDACGSQFDLQPAMTLKSNL
IAVRDHKAGEAVGYGGTWVSEGDTRLGVVAMGYGDGYPRSAPSGTPVWLNGREVPVVGRV
SMDMISVDLGPNATDKVGDEVVLWGKALPVERIAACTGISAYELITKLTQRVAMEYIGE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcaaccgctgtaatcgaccgccgcgctctgcgacataatctgcaacaggtg
cgccgccaggcgccgcaaagccgcctgattgccgttgtgaaagcaaacgcttatggacat
ggcctgctggaaacagctcacactttgcaagacgccgactgctacggcgtggcgcgcatt
ggcgaggcgctgatgctgcgctccggcggcatcgtgaaaccgatcctgctgctggaaggt
tttttctgcgctgaagatctgccggtgctggtggcgaataacatcgaaaccgcagtgcac
agcatcgaacagcttgaagcgctggagcagaccgagctggcgcgcccggtgccggtatgg
atgaagctcgataccggcatgcaccgcctgggcgtgcgtccggaacaggccgaggcgttt
tatcagcgtctgagcgcctgccgtaacgtggcgcagccggtcaatatcatgagccacttc
agccgcgccgatgaaccggactctgacgctacgctcaagcaaatgcagtgtttcgaaagt
tttgtccgtggcaagccgggccagcgctcgatcgccgcttctggcggcaccttgctgtgg
ccggatgcgcacaatgactgggtgcggccgggcattatcctgtacggcgtttctccgatg
gaggatgcctgcggcagccagtttgatctgcagccggcgatgacgctgaagtccaacctg
attgcggtgcgcgaccacaaggccggcgaggcggtgggttacggcggcacctgggtgagc
gaaggcgacacccggctgggcgtggtggcgatgggttatggtgatggttacccgcgcagt
gcgccctccggtaccccggtatggcttaatggccgcgaagtgccggtggtcggccgggta
tctatggacatgatttcggtcgatctcgggccaaacgcgaccgataaggtcggcgatgaa
gtggtgctatggggcaaggcgttgccggtcgagcgcattgccgcctgtaccggcatcagc
gcctatgagctgattaccaagctgacgcagcgcgtggcgatggaatatatcggcgaataa
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