Salinibacter ruber M8: SRM_01313
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Entry
SRM_01313 CDS
T01209
Symbol
ddl
Name
(GenBank) D-ala D-ala ligase C-terminus superfamily
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00470
D-Amino acid metabolism
srm00550
Peptidoglycan biosynthesis
srm01100
Metabolic pathways
srm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SRM_01313 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SRM_01313 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SRM_01313 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
SRM_01313 (ddl)
Enzymes [BR:
srm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SRM_01313 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
srm01011
]
Precursor biosynthesis
Amino acid ligase
SRM_01313 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
TTL
DUF5107
Motif
Other DBs
NCBI-ProteinID:
CBH24234
UniProt:
D5H879
LinkDB
All DBs
Position
complement(1484707..1485708)
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AA seq
333 aa
AA seq
DB search
MRIGLLYDTFDAYSWANDDPPDADAEYEPIETVDTLAAAVEHLGHTPVRVGTAADLRDRL
GGGLSLDAAINITEGAHSRNREAYVPILLEMAGVPCLGSDALTLSVTLDKAWTKDLVAAA
DIPTPPHRVYSAPEAVDADDLPGAFPLFVKPRYEGTSKGITPDSKVEDVAALRGAVDRIT
TTYDQDAVAEPFVAGGGEFTVAVVGHDPPEALPVLQRGVEPTTGLGLHVLEHRGAPTADR
DWEYELRGTLAPALEDRLQALSRRAFDTLDCRDFARADFRVDGDGTPWFLEINPLPTFKP
DDTFAIVAELMGRDYVDYLAEVFGRGLRRLGLS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggcctcctctacgacaccttcgacgcctattcgtgggccaacgacgacccg
ccggacgccgacgccgagtacgagcccatagagacggtcgacaccctcgcggccgccgtg
gagcacctcgggcacacccccgtccgcgtcgggaccgcggccgacctgcgcgaccggctc
ggggggggactgtcgctcgacgccgcgatcaacatcacggagggggcccacagccgcaac
cgggaggcctacgtcccgattctgctggagatggccggcgtcccttgcctcggctccgac
gcgctcaccctctcggtgacgctggacaaggcctggacgaaagacctcgtcgcggccgcc
gacatccccaccccgccgcatcgggtctacagcgcgcccgaagccgtcgacgccgacgac
cttccgggcgcgtttcccctgttcgtgaagccacgctacgaagggacgtcgaagggcatc
acgcccgacagcaaggtggaggacgttgcggccctgcggggcgcggtggaccgcatcacg
acgacgtacgaccaggacgccgtggcggagcccttcgtggcgggcggcggcgagtttacg
gtggccgtcgtggggcacgacccgcccgaggcgctgcccgttctccagcgcggggtggag
cccacgaccggcctcggcctgcacgtcctggagcaccgcggcgcccccactgccgatcgg
gactgggaatacgaattgcggggcacgctcgcccccgccctcgaagaccgcctgcaggcc
ctcagccgcagggccttcgacacgctcgactgccgcgacttcgcccgcgcggacttccgg
gtggacggcgacggaaccccctggtttctcgaaatcaacccgctgccgacgttcaaaccc
gacgataccttcgcgatcgtcgccgagctcatgggccgtgactacgtggactacctcgcc
gaggtgttcgggcgggggctgcggcgactgggactctcgtaa
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