Streptomyces rubrolavendulae: A4G23_04411
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Entry
A4G23_04411 CDS
T04616
Symbol
lgrD_3
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
srn
Streptomyces rubrolavendulae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AOT61523
UniProt:
A0A1D8G7V1
LinkDB
All DBs
Position
5142735..5150579
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AA seq
2614 aa
AA seq
DB search
MTLDRKERLKQEMLRRLAAQQARKDRDRIARLPRDGELPLSYAQQRLWFLDRLEPGRADY
NSGICLRLRGDLDPEALRRACAALVVRHESLRTTFHDKDGQGAQRVRPPREAEDALAFEY
TEARDDDTLAEALRERHHLPFDLATGPLLRVHAIRTGERRHVLLLTMHHIITDGWSMGLL
RAELDVLYRAAVERPAAPVADLPAAAGLTEPAVQYADYAVWQRERLSGERYERSLEHWRS
KLAGAEPLALPTDRPRPAVRGTRGGSHTFHVPGATADAMRQAAAAQDANLFMVLVAGVRL
VLSRWTRSDDVVVGTVVAGRDDPRLRETVGFFVNTVALRGRVDERQTFGQLLAGVKDGVL
ADLDHAEVPFDAVVDAVLDERDSSMPPLVQATVVLQNLDSGQGAGLGDLEVAPHPLPREH
SVFDLTFEFQESADGLDARIEFVTDLFDPATVERLAHDLCAVLAAAADPRPLCGTEPLGA
DGRSRALDAGRGGAGPVPRTLGELLAERAERHPGDLAVVSDREQLTFTALTDRAARFAAY
LLRRGLRRGQFVGVCLERGTDQVAALLGIMQAGGVYLPLDPGYPPERIAYVVGDAGVRSV
VTDTDRAGVLPGTVERLLIDQVREEILACEPAPHLATAADAAYMIYTSGSTGRPKGVLVA
HHGIAALAAAQGTRMDVGPGTRMLQFASPAFDAAIAELTVALLNGATAVVLPREQLHGEG
LVRALDAYGVTHVTLPPALLPGLRPEDLRPLRALLVAGEATPGELVAEFSTGRRMFNAYG
PTESTVCATMSAPLSGSATPPIGTAIEGTRLYVLDRWLRPVGPGVPGELYIAGDGLAYGY
WQRPALTAERFVADPFGPAGARMYRSGDVVRRRADGQLEFLGRSDGQVKIRGHRIESGEV
EGTLLRLPGVAQAVVDVRGSGTDRRLVAYAVPAVPGTLTVEGLRGELAAVLPEYLVPSAF
CLLDAIPLTSNGKVDRKALPAPDWAGQSGAGHVPPTTPTETALAGIWAELLGLDDPGVHD
NFFRVGGDSVGSVRMLSRAADVLGVRLPPRSVFDHPTIAGLAALLDATADAARNTTATDP
DDGRITPAPRDEPLPLSYAQRRLWFLDDFEPGGSEYNSGAALRISGPLDREALRTAVDAL
VHRHEALRTVFVARDGSPAQVVRPAAPVPLPFADLTGGSAAGLDALLATEVQRPFALDEG
PLLRLMLVGLGAEEHVLLMCVHHIVTDAWSMSLITRELGALYAAALSHPGTAAADLPARA
GLVDLPLQYADFAVWQSRRESSRAFQDSLEHWTRRLAGAEPLELPTDRPRPTVRGTAGAV
HDFAVPSDVLDDLHRLGRAHGTTLFMTLTAAVQLLLSRWTGQDDITVGTVTSGRERAELE
DIVGFFVNTLALRTRVDESATVAGLLARVRETVLDAFEHADVPFDRVVEAVAPERDPSRP
TLVQVVVALQNAPGDAPRLDGLELADHPLVREHALFDLSLDFGEVDGRLLGALEYNTDLF
DHGTAVRFADQLVTLLRMLAEDDGRSVRDLVPLSDDTRRELLAAATGPALRAGDGHVLRA
LAATAEAHPHRPALTAGDVTLSFGALDARVNRLARRLIASGAGPGDRIALVLPRTADTVT
AVFACLRAGAAYVPVDPSHPDDRIRSVIGQARPHTVLTVEASAPALRALLGPDVAVTALD
GELAPALAEGDASPPDDTDRTRPLTDAHPAYVMYTSGSTGTPKGVVVSHGNLRAMIDGYR
AVVLDALPDPERPRRAAHIAAFSFDASWDPLVWLLHGHHLHVVDERTRLDAEELCRALYD
WRVDYFDATPSYLAQLVAAGLLDEGAHRPEVITVGAEALDEALLARLRDAGVATGYNFYG
PTENTVNSLYWPIRAGERPLIGRPVPGVRAHVLDASLRPVPVGVHGELYLGGAGVAQGYA
GRPDLTAERFVADPFGPPGSRLYRTGDTVRWTPDHELEFIGRTDNQVKIRGFRIELGEIE
AVLAAVPGVRHAVAVVREDSPGVRRLVAYVVADGVSAREVRAAASASLPEYMIPAAVVLL
DELPLNANGKLDRKALPQPSHDALAGAAYVAPRTATERLLAGIWAELLGVERVGVEDNFF
ELGGDSILSIQLVSRARKAGLVLTSKDVFVRQTVAGLAAGLDADAPSGGAGAGAEQGTVT
GRVPLTPVQSWFLDSHPVAPEHFDMTLLVELDETVDLALMPRAVAALLEQHDMLRLRVTR
QGGGWTQAIVPHEDPLRVWQCVDASRMSDDALDAAIRERAHRPRPAGRLEAGPLFEAVAF
AGGATRPTRLLLTAHHLVVDGVTWRVLLEDLAAAYERVAAGKRPDLGAKSTSFQQWATRL
AEFTRDGGFDDEAAHWAGVLDGAPADVPLDHPGGDNTVASQETVVSALSEEHTRLLLQRV
PGVFRSRVNDVLLAALGRVLQEWTGSSRVLVELEGHGREELFDDVDLSRTAGWFTTVHPV
VLDLPGDADWRRTVSAVKRQLRRVPRNGIGFGALAHLGTEEQRAGLGDLPMVPVSFNYLG
QFGGQGGGDRFYRGFLPSPGGDHAPSELRTNVLDVTGSVSGDRMEFSWTYSAALHRRDTV
ERLARAFEDGLRAIAEASASGGRPAGGRTGAPAD
NT seq
7845 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgaccgcaaggagcggctgaagcaggagatgcttcgccgactggcggcgcag
caggcccgcaaggaccgcgacaggatcgcccgcttaccccgggacggcgagctgcccctg
tcgtacgcccagcaacggctgtggttcctcgaccggctggagccgggacgggccgactac
aactccggtatctgccttcggctgcgcggcgacctcgaccccgaggcgctgcgccgcgcc
tgcgccgcgctcgtcgtgcggcacgagtcgctgcgcaccaccttccacgacaaggacggc
cagggcgcgcagcgggtgcgcccgccgcgggaggccgaggacgcgctggcgttcgagtac
accgaggcgcgcgacgacgacacgctcgccgaggcgctgcgcgaacgccaccacctgccc
ttcgacctggccaccgggccgctgctgcgcgtccacgcgatacggaccggggagcggcgg
cacgtgctgctgctgacgatgcaccacatcatcaccgacggctggtcgatggggctgctg
cgcgccgagctggacgtgctctaccgggcggcggtggagcggcccgccgcgcccgtcgcc
gacctgcccgccgccgcgggcctcaccgaaccggccgtgcagtacgcggactacgcggtg
tggcagcgcgaacggctcagcggcgagcgctacgaacggtcgctggagcactggcggtcc
aagctggccggggcggagcccctggcgctgcccaccgaccggccgcgcccggccgtgcgc
ggcacccgcggcggctcgcacaccttccacgtgcccggggccaccgccgacgccatgcgg
caggccgccgcggcgcaggacgccaacctgttcatggtgctcgtcgcgggcgtccggctg
gtcctctcccgctggacccggtcggacgacgtggtcgtcggcacggtcgtggccggccgg
gacgacccgcggctgcgcgagacggtcggcttcttcgtcaacacggtggccctgcgcggc
cgggtcgacgagcggcagaccttcgggcagctgctcgccggcgtcaaggacggcgtgctg
gccgacctcgaccacgccgaggtgcccttcgacgccgtcgtggacgccgtactcgacgag
cgcgacagctccatgccgccgctcgtgcaggccaccgtggtcctccagaacctcgacagc
gggcagggcgccggtctgggcgacctcgaggtcgccccccacccgctgccgcgcgagcac
tccgtcttcgacctgaccttcgagttccaggagagcgccgacggcctcgacgcgcggatc
gagttcgtcaccgacctgttcgacccggccacggtcgaacggctcgcccacgacctgtgc
gcggtgctcgccgcagccgccgacccccggccgctgtgcggcaccgaaccgctcggcgcc
gacggccgctcccgggccctcgacgccggccggggcggtgccggccccgtgccgcgcacc
ctcggcgaactcctcgcggagcgcgccgagcggcaccccggggacctcgccgtcgtctcc
gaccgggagcagctgaccttcaccgcactgaccgaccgcgccgcacgcttcgccgcgtac
ctgctccggcgcgggctgcggcgcggccagttcgtgggcgtgtgcctggagcggggcacc
gaccaggtggccgcgctgctcggcatcatgcaggcgggcggcgtctacctgccgctcgac
cccggctatccgccggagcgcatcgcctacgtcgtgggcgacgcgggcgtgcgtagcgtc
gtcaccgacacggaccgcgcgggggtgctccccggcacggtcgagcggctcctgatcgac
caggtgcgcgaggagatcctggcgtgcgagcccgcgccgcacctcgccacggccgccgac
gccgcgtacatgatctacacctccggttccaccggccgccccaagggcgtcctggtcgcc
caccacggcatcgcggcgctggccgccgcccagggcacccgcatggacgtgggcccgggg
acgcggatgctccagttcgcctcgcccgccttcgacgcggcgatcgcggaactgaccgtg
gcgctgctgaacggcgccacggccgtggtgctgcccagggagcagctgcacggcgaggga
ctcgtccgggcgctggacgcgtacggcgtcacccatgtgacgctgccgcccgcgctgctg
cccggcctcagacccgaggacctgcggccgctgcgggcgctgctggtggccggcgaggcc
acccccggcgagctcgtcgccgagttctccacgggacgccggatgttcaacgcctacgga
cccaccgagtccaccgtgtgcgccaccatgagcgccccgctgtccggctcggccaccccg
ccgatcggcacggccatcgagggcacccgcctgtacgtcctggaccgctggctgcggccg
gtgggccccggcgtgcccggcgagctgtacatcgcgggcgacggcctcgcgtacggctac
tggcagcggcccgcgctgaccgcggagcggttcgtcgccgacccgttcggcccggcgggt
gcccgcatgtaccgcagcggtgacgtggtgcgccgacgcgccgacggccagctggagttc
ctcggccgctcggacggccaggtgaagatccgcggccaccgcatcgaatcgggcgaggtg
gagggcaccctcctgcggctgcccggcgtcgcgcaggccgtcgtcgacgtccggggcagc
ggcaccgaccgcaggctcgtcgcctacgccgtgcccgccgtgcccggcacgctcaccgtc
gaggggctgcgcggggaactggccgcggtgctgccggagtacctggtgccgtccgcgttc
tgcctgctcgacgcgatcccgctgaccagcaacggcaaggtggaccgcaaggccctgccg
gcgcccgactgggcgggccagtcgggcgccgggcacgtgccgccgaccacccccaccgag
accgccctcgccgggatctgggccgaactgctcggcctggacgacccgggcgtgcacgac
aacttcttccgcgtcggcggcgactccgtcggcagcgtccgcatgctgtcccgggccgcc
gacgtgctcggggtgcggctgcccccgcgcagcgtcttcgaccacccgacgatcgccggg
ctcgccgcactcctggacgccaccgcggacgccgcccggaacaccaccgcgacggacccg
gacgacggccgcatcacgcccgccccgcgcgacgagccgctgcccctgtcgtacgcgcag
cgccgcctgtggttcctggacgacttcgagccgggcggctccgagtacaactcgggcgcc
gcgctcaggatctccggcccgctcgaccgggaggcgctgcggaccgccgtggacgccctg
gtgcaccggcacgaggcgctgcgcaccgtcttcgtcgcccgcgacggcagccccgcgcag
gtcgtccgcccggccgcgcccgtgccgctccccttcgccgacctgaccggcggctccgcg
gccggactcgacgcgctgctcgccaccgaggtccagcgccccttcgcgctggacgagggc
ccgctgctgcggctgatgctcgtcgggctcggcgccgaggagcacgtcctgctgatgtgc
gtccaccacatcgtcaccgacgcctggtcgatgtccctgatcacccgggagctcggcgcc
ctgtacgcggcggccctgtcccacccgggcacggccgccgcggacctgcccgcacgggcg
gggctcgtcgacctgcccctgcagtacgcggacttcgccgtctggcagagccgcagggag
tcctcgcgggcgttccaggactccctggagcactggacgcggcgcctggccggggcggag
ccgctggagctgcccaccgaccgcccgcgccccaccgtgcgcggcaccgcgggcgcggtc
cacgacttcgccgtcccctccgacgtcctggacgacctgcaccggctcggccgggcgcac
ggcaccaccctgttcatgacgctcaccgccgccgtgcagctgctgctgtcccggtggacc
gggcaggacgacatcaccgtcggcacggtcacctccggcagggaacgcgccgagctggag
gacatcgtcgggttcttcgtcaacaccctcgccctgcgcacccgggtggacgagtcggcg
accgtcgccgggctgctcgcgcgggtccgcgaaaccgtcctcgacgccttcgagcacgcc
gacgtgcccttcgaccgcgtggtggaggcggtggcgcccgagcgcgacccgtcgcggccc
accctcgtccaggtggtcgtcgcgctccagaacgcgcccggcgacgccccgcgcctcgac
ggcctggagctcgccgaccaccccctggtccgggagcacgcgctgttcgacctcagcctc
gacttcggcgaggtggacggacggctgctgggcgccctggagtacaacaccgacctgttc
gaccacggcaccgccgtccgcttcgccgaccagctcgtgacgctgctgcggatgctggcc
gaggacgacggccgcagcgtgcgcgacctcgtcccgctgtccgacgacacccggcgcgag
ctgctggccgccgcgaccgggcccgccctgcgggccggcgacggccacgtcctgcgggcc
ctggccgcgaccgccgaggcacacccgcaccggcccgcgctgaccgccggggacgtcacc
ctgtccttcggcgctctcgacgcccgcgtcaaccggctggcccgccgcctcatcgcctcc
ggtgccgggcccggcgaccggatcgccctggtcctgccgcgcacggcggacacggtgacg
gccgtgttcgcctgcctgcgggccggtgccgcctacgtccccgtcgacccgtcccacccg
gacgaccgcatccgctccgtcatcggccaggcccgtccgcacaccgtcctcaccgtcgag
gcgagcgcccccgcgctgcgcgcgctgctcggccccgacgtggcggtgaccgccctggac
ggggagctggcccccgcgctcgcggagggcgacgcctcgccgccggacgacaccgaccgc
acccggccgctcaccgacgcgcaccccgcgtacgtgatgtacacgtccggctccaccggc
acccccaagggcgtcgtggtgagccacggcaacctccgggccatgatcgacggctaccgg
gcggtcgtcctcgacgcgctgcccgacccggagcggccgcgccgcgccgcgcacatcgcc
gccttctccttcgacgcctcctgggaccccctggtgtggctgctccacggccaccacctg
cacgtggtggacgagcggacccggctggacgccgaggagctgtgccgcgccctgtacgac
tggcgcgtcgactacttcgacgcgaccccgtcctacctcgcccagctcgtcgcggccgga
ctgctcgacgagggcgcccaccggcccgaggtgatcaccgtcggcgccgaggcgctcgac
gaggccctcctcgcccggctccgggacgccggggtggccaccggctacaacttctacggc
cccaccgagaacaccgtgaacagcctgtactggccgatcagggccggtgagcggcccctc
atcggccgccccgtgcccggcgtgcgcgcccacgtcctggacgcctcgctgcggccggtg
cccgtcggcgtgcacggcgagctgtacctcggcggcgcgggcgtcgcgcaggggtacgcc
gggcggcccgacctgacggcggaacgattcgtcgccgaccccttcggcccgcccggcagc
cgcctctaccggaccggcgacacggtccgctggacccctgaccacgagctggagttcatc
ggccgcaccgacaaccaggtcaagatccgcggcttccgcatcgagctgggcgagatcgag
gccgtcctggccgcggtgccgggcgtgcggcacgccgtcgccgtcgtgcgcgaggactct
cccggagtccgccgcctggtcgcctacgtggtggccgacggcgtctccgcccgggaggtc
agggcggcggcctccgcgtccctgcccgagtacatgatccccgccgccgtggtgctcctc
gacgagctcccgctcaacgccaacggcaagctggaccgcaaggccctgccgcagccctcc
cacgacgccctcgccggagccgcctacgtggcgccgcgcaccgcgacggaacgcctgctc
gccgggatctgggccgagttgctcggtgtcgaacgcgtcggggtcgaggacaacttcttc
gagctcggcggcgactccatcctcagcatccagctggtgtcccgggcccgcaaggcgggg
ctcgtcctgacctcgaaggacgtgttcgtacggcagaccgtggccggactggccgccggg
ctcgacgcggacgccccgtccggcggggccggggccggggccgagcagggcaccgtgacg
ggccgggtgccgctcacccccgtacagagctggttcctggacagccaccccgtagcgccc
gagcacttcgacatgacgctgctggtggaactcgacgagaccgtcgacctcgccctgatg
ccccgggccgtcgcggccctcctggagcagcacgacatgctcaggctgcgcgtcacccgc
cagggcggcgggtggacccaggccatcgtcccgcacgaggacccgctgcgcgtctggcag
tgcgtcgacgcctccaggatgagcgacgacgcgctggacgccgcgatacgcgagcgggcg
caccgaccgcggcccgcgggacgcctggaggcgggcccgctgttcgaggccgtcgccttc
gccggcggcgccacccgccccacccggctgctgctcaccgcgcaccacctggtggtcgac
ggggtgacctggcgggtcctcctggaggacctggccgccgcctacgagcgggtcgcggcc
gggaagcgccccgacctgggcgccaagtccacgtccttccagcagtgggcgacccggctc
gcggagttcacccgcgacggcggcttcgacgacgaggccgcccactgggcgggcgtcctc
gacggcgcgccggccgacgtgccgctggaccaccccggcggggacaacaccgtcgcctcg
caggagacggtcgtctccgcgctgtccgaggagcacacccggctgctgctgcagcgggtg
ccgggtgtcttccgcagccgcgtcaacgacgtcctgctggccgcgctgggccgcgtgctc
caggagtggaccggctcgtcccgggtgctggtggagctggagggccacggccgcgaggag
ctcttcgacgacgtggacctctcccgtaccgcgggctggttcaccaccgtccacccggtc
gtcctcgacctgcccggggacgcggactggcgccgcacggtgtcggccgtcaagcggcag
ctgcgccgcgtgccccgcaacggcatcggcttcggcgcgctggcccacctgggcaccgag
gagcagcgggccgggctgggcgacctgccgatggtgccggtctccttcaactacctgggc
cagttcggcggccagggcggcggggaccgcttctaccgcggcttcctcccgagcccgggg
ggcgaccacgccccgtccgagctccgcacgaacgtcctggacgtcacgggcagcgtgtcg
ggcgaccggatggagttctcctggacgtactcggcggcgctccaccggcgggacaccgtc
gagcggctcgcgcgggccttcgaggacggcctgcgcgcgatcgcggaagcgtccgcctcc
ggcggcagacccgccggcgggcggaccggcgcaccggcggactga
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