Skermanella rosea: JL101_032265
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Entry
JL101_032265 CDS
T07666
Name
(GenBank) LysR family transcriptional regulator
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sroe03000
]
JL101_032265
Transcription factors [BR:
sroe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JL101_032265
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
UEM07594
LinkDB
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Position
pSR-2:183446..184504
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AA seq
352 aa
AA seq
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MQTGFGTSVGRPRLRSVGSPPRQDGGRQTSPHRRINLAGVDLNLLVALEALLVERNVTHA
ADRVGLSQPAMSRALGRLRGLFDDELLVRSSSGLVPTARSEQLAAELPEALNMLRTLLAS
RETAPGSWEATVNIDLPDHQALDLLPRLLPRLREAAPGVTVVTAPLGSRTLRALESGAVD
LAVGQLRTTPFGFYRRTILTDRFVCLLRAGHPALQGGTPEPESLVGLRHVAIAPPALEEP
GLVYDAVAMLEIPDPSPVVVQNTMAAAMLVAETDMVLTIPRRTATRIARMLPLAITAPPT
PLPAYELSLVWHERLHRDPNCAWLRGELAASLAPAAGSSAGQAGAHPLAGAA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccggtttcggaacaagcgtcggacgtccccgtctgcggtcggtcggctcccct
ccccggcaggatggcggacggcagacatcgccgcaccggcggatcaatctcgcgggtgtc
gatctcaatctgttggtggcgctcgaggcgctgctggtggagcgcaacgtaacgcacgca
gccgacagggtcggtctgagccagccggcgatgagtcgcgcattgggccggctgcgaggc
ttgttcgatgacgagttgctggtgcgatcgtcctccggcctcgtgccgaccgcgcgttcc
gaacaactggcggccgaactgcccgaagccctgaacatgctgcgcactctgctggcatcg
cgggaaacggcgccgggatcgtgggaagccacggtcaacatcgaccttcccgatcatcag
gcgctggacctgttgccacggctgctcccccgcttgcgagaagcggcgccgggcgtcacc
gtcgtcaccgcccctctcggcagccggacgctgcgcgcccttgaaagcggcgccgtcgat
cttgccgtcggtcagctcaggaccactcccttcggcttctaccgccgcaccatcctgacc
gatcggttcgtctgcctgctgcgcgcgggtcacccggcactccagggcgggacgccggag
ccggaaagcttggtcggcctccgtcatgtcgcgatcgcaccgccggccctggaagagccc
ggccttgtctacgatgccgtcgcgatgctggaaatccccgaccccagtccggtcgtggtc
cagaacacgatggcggcggcgatgctggtagccgaaaccgacatggtcctgaccatcccg
cgccggaccgcgacccgcatcgcgcggatgctgccgctggccataacggcacccccgacg
cccctgccggcctacgagctgtcgctggtgtggcacgagcgtcttcatcgcgatccgaac
tgcgcgtggctgcgcggcgagctggcggcctccctggccccggcagccggctcgtcggct
gggcaggccggcgcacacccccttgccggggccgcgtga
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