Serratia sp. AS12: SerAS12_0217
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Entry
SerAS12_0217 CDS
T01502
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
srs
Serratia sp. AS12
Pathway
srs00071
Fatty acid degradation
srs00280
Valine, leucine and isoleucine degradation
srs00310
Lysine degradation
srs00362
Benzoate degradation
srs00380
Tryptophan metabolism
srs00410
beta-Alanine metabolism
srs00640
Propanoate metabolism
srs00650
Butanoate metabolism
srs00907
Pinene, camphor and geraniol degradation
srs00930
Caprolactam degradation
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
srs01120
Microbial metabolism in diverse environments
srs01200
Carbon metabolism
srs01212
Fatty acid metabolism
Module
srs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SerAS12_0217
00650 Butanoate metabolism
SerAS12_0217
09103 Lipid metabolism
00071 Fatty acid degradation
SerAS12_0217
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SerAS12_0217
00310 Lysine degradation
SerAS12_0217
00380 Tryptophan metabolism
SerAS12_0217
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SerAS12_0217
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SerAS12_0217
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SerAS12_0217
00930 Caprolactam degradation
SerAS12_0217
Enzymes [BR:
srs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SerAS12_0217
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SerAS12_0217
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SerAS12_0217
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SerAS12_0217
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AEF48331
LinkDB
All DBs
Position
complement(244594..246783)
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AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSINKLDTRTVASLGEALDVLEKQTELKGLLVRSS
KAAFIVGADITEFLSLFAAPAEKLHQWLAFANATFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLVEAALKMLQQAIDGQLDWRAYRQPKLDPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
SQAKKLAKNVEAPTQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLALGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKIKAAVLSEVEGLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDNTIAAVVAY
ATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGVDFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAAVSQPRQTISDEEIIARMMIPMINEVVRCLEENIIASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYTHLGALYQVPAGLRTKAERNESYYPVATPL
SDIATGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagttg
gtgttcaatgccccgggctcgataaacaagctggatacccgcaccgttgccagcctgggc
gaagcgctcgacgtactggaaaaacagaccgagctgaaagggctgctggtgcgttccagc
aaggccgcatttattgtcggtgccgatatcaccgaattcctttcgctgttcgcggctccg
gctgaaaaattgcaccaatggctggccttcgccaacgcgacctttaaccggctggaagat
ctgccggtaccgaccatttcggccattaacggctatgcgctcggtggcggctgcgaatgc
attctggcaaccgacttcagggtcgcctctcccgatgcgcgcattggcctgccggaaacc
aagctgggcattatgccgggcttcggcggttccgttcgcttgccacgcctgttgggtaac
gacagcgcactggagattatcgccgccggtaaagacgtcagcgccaaagacgcgctgaag
gtcggtctggtggatgcggtggtcgcaccggaaaaactggtagaagccgcgctgaaaatg
ctgcaacaggccattgatggccagttggactggcgcgcctatcgtcaaccgaaactcgat
ccgttgaaactcagcccaatcgaagcggccatgagcttcaccactgccaaaggcatggtg
ctgcaaaccgcaggaaaacattatccagcgccgatgactgcggtgaaaaccatcgaagcc
gccgccaaattgggccgcgatgaagccttgaaattggaaaccgccagctttgtgcctttg
gcccgttccaacgaagcgcgcgcactggtcggtatcttcctcaacgatcagtttgtgaaa
agccaggcgaaaaagctggccaaaaacgtggaagcgccgacgcaggctgcggttctgggc
gccggtatcatgggaggcggcatcgcttaccagtccgcgctgaaaggcgtgccggtgata
atgaaagacatcagcgacaaatccctggcgcttggcatgaatgaagccgccaagctgctg
aacaaacagctggagcgcggcaaactggatggcctgaagatggcgcaggtgctgtcgacc
attcaaccgacgctggattatgccggtatcgaacgcgcgcaggtgatcgttgaagctgtg
gtcgagaatccgaagattaaagcggcagtgttgtccgaggtggaaggtctgatcggtgaa
gacacagtgctggcatccaatacctcgaccattccgattaatcacctggcaaaatcgctg
aagcgcccgcaaaacttctgtggcatgcacttctttaacccggtgcaccgcatgccgctg
gtggaaatcatccgcggcgagcagaccagcgacaacaccatcgccgccgtagtggcctac
gccacccgcatgggcaaaacgccgatcgtggtcaacgactgtccggggttcttcgtcaac
cgcgtactgttcccctattttgccggcttcagcatgctgctgcgtgatggggtggatttc
cgccaaatcgataaggtaatggaaaaacagtttggctggccaatgggcccggcttacctg
ctcgacgtggtggggatcgataccgcgcaccatgcccaggcggtaatggctgccggtttc
cctgagcgtatgggcaaagattatcgcgacgccattgacgtgatgttcgacaaccaacgt
tttggtcagaaaaaccagttgggcttctaccgttacagtcaggacaacaaaggcaagccg
cgtaaagataacgatgagcagaccgatgcgctgttggccgcagtctcccagccacgccag
accatcagtgatgaagaaattatcgctcgaatgatgatcccgatgatcaacgaagtggtg
cgctgcctggaagaaaacatcatcgccagcccggctgaagccgatatggcattggtttac
ggcatcgggttccctccgttccacggtggggcattccgttacctggatacgcttggtacc
gccaactatgtcgaactggcccagcgttacacgcatcttggcgctctgtatcaagtgcct
gccggcctgcgcaccaaagctgaacgtaatgaaagctactacccggtggcgacgccattg
tccgatatcgccactggccaaccggcatga
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