Serratia sp. AS12: SerAS12_1697
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Entry
SerAS12_1697 CDS
T01502
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srs01002
]
SerAS12_1697
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srs01011
]
SerAS12_1697
Peptidases and inhibitors [BR:
srs01002
]
Cysteine peptidases
Family C82
SerAS12_1697
Peptidoglycan biosynthesis and degradation proteins [BR:
srs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SerAS12_1697
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEF49779
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Position
1840316..1842157
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AA seq
613 aa
AA seq
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MLLKNGNTLRRLALSCAIASGLASSLPAWATVPAFPVASSGMSVAQSRSELLAALPKGMT
PHYLSTLAPLYAANRMQLMWQDREAVQQFQQQLAELAISGVQPQFTQWVKLLTNPAISGV
ARDVVLSDAMLGYLQFVSAIGANGNSWLYSNIPYKLGLPPNAVINQWQLAVRQGKTLSYV
TKLAPQHPQYAKMHQALRDMLADNRPWPQMANGPSLRPDQLSNDIAALREILARNGMLTT
TAVSVQTQEPPAVLTGSRNEPDDGGLSVDEEKSRESKSVVISPSAAPVKDLAASPESPFA
QQPAGPVTVTDNAYTPDLVEGVKRFQKWQGLTADGVIGARTREWLNVSPQTRASLLALNI
QRLRILPGYVDTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMNSALNNVVVNP
PWNVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPYR
IRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLL
QDAGWNNTRVSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRS
GAQILAQAEKLMQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaatggaaacactttacggcgtctggcgctgagctgcgcaatcgcatct
ggacttgcgtcgtcgttacccgcatgggcaaccgtgcctgcgtttccggtagcgtcatcc
ggcatgtcagttgcgcaaagccgttcggaattattggcagcattgccgaaaggaatgaca
ccgcactatctttcaacgctggctcctttgtacgccgctaaccggatgcaactgatgtgg
caggatcgcgaggcggttcagcagttccagcagcagttggccgagctggccatctccggg
gtacagccacagtttacccaatgggtgaagctgctgaccaatccggcgattagcggcgta
gcgcgcgacgttgtcctgtctgatgctatgctggggtatttgcagttcgtttcagccatc
ggcgccaacggtaacagctggctgtatagcaatattccctacaagctcggcctgccgcct
aatgcggtgattaatcaatggcaactggcggtgcgtcagggcaagacgctgtcttatgtc
accaaactggcgccgcagcacccgcaatatgccaagatgcatcaggcgctgcgcgacatg
ctggccgataaccgtccatggccgcagatggctaacggtccgagcctgcgccccgatcaa
ctgagcaacgacattgccgccctgcgtgagatcctggcgcgcaatggcatgctgaccact
accgcagtatcggtgcaaacgcaggaaccgcctgcggtactgaccggctcgcgcaatgaa
ccggacgatggcggcttgtcagtcgatgaagaaaaaagccgcgagagcaaaagtgtggtt
atcagcccgtctgccgcaccggtaaaagatcttgccgcatcgccggaatcgccattcgca
cagcaacctgccggcccggtgaccgttactgataacgcttatacccccgatctggtcgaa
ggcgttaaacgcttccagaaatggcaaggcttgaccgccgacggcgtgattggcgcccgt
acccgcgaatggctcaacgtgtcgccgcaaacgcgcgcttcgctgttggcattgaatatc
cagcgtttgcgcatcctcccaggctacgtcgacaccgggatcatggttaacattcccaat
tactcgctgacttactaccagaacggcaatgaagtgctttcctcacgggtcatcgtcggt
cggcctagccgcaagacgccgctgatgaacagtgcgctgaacaacgtcgtggtcaacccg
ccgtggaatgtgccgactacgctggtacgcgaagatattgtgccaaaggcaatgcgtgac
ggcagctatttccagaaacacggctataccgtgctttctggctggagcaatgacgctgaa
gtcattaacccggcgatgattgactggaacatggtgtctgcgcgtaatttcccttaccgc
attcgccaggcgccaggtgccaccaactcactggggcgtttcaaattcaacatgccgagc
tcggatgctatctatctgcacgacacgccgaaccataatctgttccagaaagatattcgt
gccctgagttccggttgcgtgcgcgttaacaaggcatctgatttggctaatatgctgctg
caagatgccggctggaacaatacccgcgtttcctccacccttaaagggggaaatacaacc
tacgtaaatatccgacagcatattccggttaaattgtattatttaaccgcctgggtttct
gatgatggaaagccacaatttcgtacagatatttacaattacgatgatacggtgagatcg
ggtgcacaaattttggctcaggctgaaaaattaatgcaataa
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