Serratia sp. AS12: SerAS12_2053
Help
Entry
SerAS12_2053 CDS
T01502
Name
(GenBank) Ribosomal RNA small subunit methyltransferase F
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srs03009
]
SerAS12_2053
Enzymes [BR:
srs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
SerAS12_2053
Ribosome biogenesis [BR:
srs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SerAS12_2053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AEF50130
LinkDB
All DBs
Position
complement(2204071..2205507)
Genome browser
AA seq
478 aa
AA seq
DB search
MAKPASVFLPPAFLDATRAVMPAELSMDDFIAACQRPLRRSLRVNTLKISVADFQALVND
YDWRLEPIPWCAEGFWIEREDEELRLGSAAEHLSGLFYIQEASSMLPVSALFADREKPHR
VLDVAAAPGSKTTQIAALMNNQGGIVANEYSASRVKVLHANISRCGVKNVALTHFDGRVF
GAALPESFDAILLDAPCSGEGVVRKDPDAMSNWSPESVAAIAATQRELIDSAFHALAPGG
VMVYSTCTLNAQENQQIVNGLLATYGDAVSIEPLGELFPGAEKALTTEGFLHVFPQIYDS
EGFFVARLRKNHSVTPLPKPSYKLGKFPFTPLSGKDSTVVSQAAATSGLAWDETSRLWAR
DKEIWLFPAELEPLISKVRFSRIGVKLAECFPKGYRWQHEAVIALATADGKQRFELDAAL
AQEWYHGRDLYPEPPPQSDECILTYQQQPLGIAKRIGSRIKNNLPRELVRDGTLDFHQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaacctgcctccgtttttttgcctcccgcttttctcgacgcgacgcgcgccgtc
atgcccgccgaactgtcgatggacgattttatagccgcctgccaacgcccgctgcgccgc
agcctgagggtcaatacgttgaagatcagcgtcgccgattttcaggcgttggtgaacgat
tatgactggcggttggaacccattccctggtgtgcggaaggtttttggatcgagcgtgag
gatgaagagttgcggcttggcagcgcggcggaacacctgagcggcctgttttacattcag
gaagccagctcaatgctgcccgtcagcgcactgttcgccgatcgggaaaaaccgcatcgg
gtactggacgtcgccgcagcgccgggttccaaaaccacccagattgccgcgttgatgaac
aatcagggcggtatcgtggccaacgaatactccgccagccgggttaaagtccttcacgcc
aacatcagccgctgtggcgtaaaaaacgtcgcgctgacccactttgacggccgggtgttc
ggcgcggcgctgccggaaagctttgatgccattttgctggacgccccctgctccggcgaa
ggcgtggtgcgcaaagacccggacgccatgagcaactggtcgccggaaagcgttgccgct
attgcggcaacccaacgcgaactgatcgacagcgctttccacgctctggcccctggcggc
gtcatggtttactccacctgcacgctcaacgcgcaggaaaatcagcaaatcgtcaacggc
ctgttggcgacctacggcgatgcggtgagcattgaaccgctgggcgagctgttccccggt
gcggaaaaggcgcttaccaccgaaggcttcctgcacgtcttcccgcagatctacgacagc
gagggctttttcgtggcacgcctgcgcaagaaccattctgttaccccgttgccgaaaccg
agttacaaactgggcaaattcccgttcaccccgctttccggcaaggattcgaccgtggtt
agccaggccgcagcaacctcggggctcgcctgggatgaaaccagccgactgtgggcgcgc
gataaagagatctggctgttccctgccgaactggagccgctgatcagcaaagtgcgcttc
tcacgcatcggggtgaagctggccgagtgtttccctaaaggataccgctggcaacatgaa
gccgttatcgcgctggccaccgccgacggcaaacagcgtttcgagctggacgccgcgctg
gcgcaagagtggtatcacggccgcgatctgtatccggagccaccgccgcagagcgatgaa
tgcatcctgacctaccaacagcaaccgctgggtatcgccaaacgtatcggcagccgcatt
aaaaacaacctgccgcgcgaactggtccgcgacggcacactggatttccatcaataa
DBGET
integrated database retrieval system
