Salinibacter ruber DSM 13855: SRU_1258
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Entry
SRU_1258 CDS
T00312
Name
(GenBank) L-2,4-diaminobutyrate decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru00350
Tyrosine metabolism
sru00360
Phenylalanine metabolism
sru00380
Tryptophan metabolism
sru01100
Metabolic pathways
sru01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
SRU_1258
00360 Phenylalanine metabolism
SRU_1258
00380 Tryptophan metabolism
SRU_1258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sru04147
]
SRU_1258
Enzymes [BR:
sru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
SRU_1258
4.1.1.105 L-tryptophan decarboxylase
SRU_1258
Exosome [BR:
sru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SRU_1258
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
SepSecS
DUF5549
Motif
Other DBs
NCBI-ProteinID:
ABC45824
UniProt:
Q2S349
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All DBs
Position
1580417..1581973
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AA seq
518 aa
AA seq
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MSVVAEGEHPSPTLQGFAQLAFRGSVSHLLSLSLFTRAVPMDHDRLELSPEKMRTLGYRV
VDLLVDHFADGGDESLGETPSRDELEAHLREDLPEEGTPPEAVLDQVEAEVLPNTMRVDH
PRFFGFVPGPNNFVGVLADMLASGFNVFSGTWISGAAAAQIELVVIDWLRTLCGLPEAAG
GLFTSGGSMANVTALAAARHARLDDDVTGAVAYCSDQTHTSVDRALRLLGFGPDQLHRVP
ADDQYRLDPESLEEAIAADRAAGRRPFCIIANAGTTNTGAVDPLPALAALADAEDLWLHV
DGAYGAPTVVCKRGQNRLVGIERVDSLTLDPHKWLFQPFEIGGVLVRDEQHLRRAFRLEA
EYLEDAVGEEDEVNFSASGIQLTRSFRALKLWMTLKVFGREHVATAVARGFERAEQAERL
LRGRPGWTVVTPAQMGIITFRCEPDGWTPDQVDALTRRLIAAVNDEGAAFLTQTTLDGRP
VLRLCPINPRTTAKDLEETIARLDALQAEIEVGATPAS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtcgctgagggcgaacatccatcccccacgctccagggcttcgcgcaactc
gcgttccggggctccgtttcccacctgctttcgctttcattgtttacgcgtgctgtgccc
atggatcacgaccgcctcgaactctcccccgaaaaaatgcggacgctcggctaccgggtc
gtggatctcctggtcgaccacttcgcggacggaggggacgaatcgctgggggaaacgccg
tcgcgagacgaactagaggcccacctccgggaagacctcccggaagaggggacccccccg
gaggccgttcttgatcaggtggaggcggaggtgctgccgaacacaatgcgggtggaccac
cctcgcttcttcgggttcgtgccggggccgaacaacttcgtcggcgtgctcgccgacatg
ctggcgtcggggttcaatgtgttctcggggacctggatctcgggcgccgccgccgcgcag
atcgaactggtggtgatcgactggctgcggacgctctgtggcctcccagaggccgcaggg
gggctgttcacgagcgggggctcgatggcaaacgtcacggccctggccgccgcccgccac
gcccggctggacgacgacgtgacgggggccgtcgcctactgctccgaccagacccacacg
tcggtcgaccgggccctgcggctgctcgggttcggccccgaccagctccaccgggtgccc
gccgacgatcagtaccggctcgatcctgagtccctggaagaggccatcgcggccgaccgg
gcggcggggcggcgtcccttctgcatcatcgccaacgcgggcaccaccaacaccggggcc
gtcgatccgctgcccgccctggcggccctggccgacgccgaagacctgtggctgcacgtg
gacggggcgtacggggcgccgacggtcgtctgcaagcggggccagaaccggctcgttggc
atcgaacgggtcgattcgctgaccctcgatccgcacaagtggctcttccagcccttcgag
atcgggggcgtgctcgtgcgcgacgagcagcacctccgccgggcctttcggctggaggcg
gagtacctggaggacgcggtgggggaggaggacgaggtcaacttctcagcctccggcatc
cagcttacgcgcagcttccgggcgctcaagctctggatgacgctcaaggtgtttggccgc
gagcacgtcgccaccgcggtggcgcggggcttcgagcgggccgagcaggccgagcggctg
cttcgggggcggcccgggtggacggtggtgaccccggcccagatgggcatcatcacgttt
cgctgcgaaccggacgggtggacgcccgaccaggtggacgcgctcacacgccgcctcatt
gcggccgtaaacgacgaaggggcggccttcctgacgcagacgacgctcgacggccggccc
gtcctccggctgtgccccatcaacccacggacgacggcgaaggacctcgaagaaacgatt
gcacggctcgacgccctccaggccgaaatagaggtgggggcaaccccggcatcctga
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