Streptomyces rutgersensis: F0345_07590 Help Entry F0345_07590       CDS       T08623                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism srug  Streptomyces rutgersensis Pathway srug03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:srug00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     F0345_07590  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:srug03400]     F0345_07590 Enzymes [BR:srug01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      F0345_07590 DNA repair and recombination proteins [BR:srug03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      F0345_07590 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  QNE80999 UniProt:  A0A7G7C083 LinkDB All DBs Position complement(1844558..1845505) Genome browser AA seq 315 aa AA seqDB search MSGGQGAGEDGERLRVGRRALTVHRPGKVLYPGDGLTKGDVVGYYRAVAPHMVPHLRERP LMLERHPEGVGEQPHFMQKNAGAHYPGWVRRAPMAKEGGGTVDHPVCDDAATLVYLADQA ALTFHRWLSTVGRPHHPDLLVLDLDPPGDDFAAVREAALRFRDLLAEVELDPLLMTTGSR GLHLVVRLDGRAGHDTVRAFAQDAAELLASRHPDRLTTAVRKGRRGDRLFLDSGRNAYAQ TAVAPWSLRSRPGAPVAAPLTWEQLDDPGLDARTFSLRDPDGVHAHAASRPWARPPRPRG IAAAARRLEKLRRGG NT seq 948 nt NT seq  +upstreamnt  +downstreamnt gtgagcggcggccagggggcgggggaggacggcgagcggctccgcgtcgggcggcgcgcc ctcaccgtccaccggcccggcaaagtgctctatcccggcgacggcctcaccaagggcgac gtcgtcgggtactaccgggccgtcgccccgcacatggtgccccacctgcgcgagcgcccg ctcatgctggagcgccaccccgaaggcgtcggcgagcagccgcacttcatgcagaagaac gccggcgcccactaccccgggtgggtgcgccgcgcgccgatggccaaggagggcggcggc accgtcgaccacccggtctgcgacgacgccgccaccctcgtctacctcgccgaccaggcc gcgctcaccttccaccgctggctctccaccgtcgggcgcccgcaccacccggacctgctc gtcctcgatctcgacccgccgggcgacgacttcgcggcggtccgcgaggccgccctgcgc ttccgcgacctgctcgccgaggtggagctggacccgctgctgatgaccaccggctcgcgc ggactgcacctcgtcgtccgcctcgacggccgggccggtcacgacaccgtccgggccttc gcccaggacgccgccgagctgctggcctcccgccatcccgaccggctcaccaccgccgtc cgcaagggccggcgcggcgaccggctcttcctcgactccggccgcaacgcctacgcccag accgccgtggctccctggtccctccgctcccgccccggcgcacccgtcgccgcgcccctg acctgggagcagctcgacgaccccggcctggacgcccgtaccttctcgctccgtgacccg gacggcgtacacgcgcacgccgcctcccggccctgggcgaggccgccgcggccgcgtggg atcgccgcggccgcgcggcggctggagaagctgcgccgcggcggctga

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