KEGG   Streptomyces reticuli: TUE45_01593Help
Entry
TUE45_01593       CDS       T04246                                 

Definition
(GenBank) Putative DNA ligase-like protein/MT0965
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
srw  Streptomyces reticuli
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:srw00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    TUE45_01593
   03410 Base excision repair
    TUE45_01593
   03420 Nucleotide excision repair
    TUE45_01593
   03430 Mismatch repair
    TUE45_01593
Enzymes [BR:srw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TUE45_01593
    6.5.1.6  DNA ligase (ATP or NAD+)
     TUE45_01593
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TUE45_01593
DNA replication proteins [BR:srw03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    TUE45_01593
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     TUE45_01593
DNA repair and recombination proteins [BR:srw03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TUE45_01593
   NER (nucleotide excision repair)
    Other NER factors
     TUE45_01593
   MMR (mismatch exicision repair)
    Other MMR factors
     TUE45_01593
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
I:1954531..1956069
Genome map
AA seq 512 aa AA seqDB search
MLLTRLAEVSREVAATAARSRKTALLAELFRDAEADDVPIVIPYLAGRLPQGRLGVGWKV
LGRRVPPAAEPSLTVREVDARLTELGKVSGPGSQAERTRLVGELMAAATEAEQRFLLGLL
TGEVRQGALDAVAVEGLAQATGADPADVRRAVMLAGSLQTVARALLGEGPGALERFRLTV
GRPVLPMLAHSASSVAEAVEKLGACAVEEKLDGIRVQVHRDGDTVRVHTRTLDDITDRLP
EVTSAARQLRGERFILDGEVISFDAAGRPRSFQETAGRVGSRTDVLKAAEETPVSPVFFD
VLSVDGRDLLDLPFAERHAELARLVPEPMRVRRTVASGPGDIPEAERFLADTLARGHEGV
VVKALDAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARNPDGTFA
MLGKTFKGMTDAMLAWQTERLRELAVEDDGRVVRVRPDLVVEIAYDGLQRSSRYPAGVTL
RFARVVRYREDKRPEEADTVEALLAAHPEVTP
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctgacccggctggccgaagtgtcccgggaggtcgccgcgacggcggcccgatcc
cggaagaccgcgctgctcgcggagctgttccgggacgcggaggcggacgacgtgccgatc
gtcatcccctatctggccggacggctcccgcagggccggctcggcgtcggctggaaggtg
ctgggccgccgggtcccgccggccgccgagccttcccttaccgtccgcgaggtcgacgcc
cggctcaccgagctgggcaaggtgtccgggcccggctcgcaggcggagcggacccggctc
gtcggtgagctgatggccgcggcgaccgaggccgagcagcgcttcctcctcggcctgctc
accggcgaggtccggcagggcgccctggacgcggtcgcggtggagggcctcgcccaggcg
accggcgcggacccggcggacgtgcggcgggccgtgatgctcgcgggctcgctccagacg
gtcgcccgggcgctgctcggcgaggggcccggggcgctggagcggttccggctcaccgtg
ggccgcccggtgctgccgatgctggcgcacagcgcctcctcggtcgccgaggcggtggag
aagctgggcgcctgcgcggtggaggagaagctggacggcatccgggtccaggtgcaccgg
gacggggacaccgtgcgggtgcacacccgcacgctggacgacatcaccgaccggctgccg
gaagtgacctcggcggcacggcagttgcggggcgaacggttcatcctggacggcgaggtg
atctccttcgacgcggcgggccggccccggtccttccaggagacggcgggccgggtgggt
tcccggaccgacgtgctcaaggcggccgaggagaccccggtctcccccgtcttcttcgac
gtcctctcggtcgacggacgcgacctgctcgacctgccgttcgccgagcggcacgcggag
ctggcccggctggtgccggagcccatgcgggtccggcgcacggtggcctcgggccccggg
gacatcccggaggcggaacgcttcctcgccgacaccctggcccgcggccacgagggcgtg
gtggtcaaagcgctcgacgcgccctacagcgcgggccggcgcggcgcctcctggctcaag
gtcaagcccgtccacaccctggacctggtggtgctggccgccgagtggggccacggccgc
cgcaccggcaggctgtccaacctccacctcggcgcccgcaacccggacggcaccttcgcg
atgctcggcaagaccttcaagggcatgaccgacgcgatgctcgcctggcagaccgagcgg
ctgcgggaactggcggtcgaggacgacggccgggtggtcagggtccgccccgacctcgtg
gtggagatcgcctacgacggcctccagcgctcctcccgctacccggccggcgtcaccctc
cgcttcgcccgcgtggtccgctaccgcgaggacaagcgccccgaggaggccgataccgtc
gaggccctgctggcggcccacccggaggtcacaccgtga

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