Streptomyces reticuli: TUE45_06401
Help
Entry
TUE45_06401 CDS
T04246
Symbol
lgrD_3
Name
(GenBank) Linear gramicidin synthase subunit D
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
srw
Streptomyces reticuli
Pathway
srw00470
D-Amino acid metabolism
srw00552
Teichoic acid biosynthesis
srw01100
Metabolic pathways
srw01503
Cationic antimicrobial peptide (CAMP) resistance
srw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TUE45_06401 (lgrD_3)
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
TUE45_06401 (lgrD_3)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUE45_06401 (lgrD_3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
TUE45_06401 (lgrD_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
srw01504
]
TUE45_06401 (lgrD_3)
Enzymes [BR:
srw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
TUE45_06401 (lgrD_3)
Antimicrobial resistance genes [BR:
srw01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
TUE45_06401 (lgrD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
XOO_2897-deam
HMA
Motif
Other DBs
NCBI-ProteinID:
CUW31652
LinkDB
All DBs
Position
I:7222120..7223592
Genome browser
AA seq
490 aa
AA seq
DB search
MSAVTHRNGAGSVPEMVLAQARRQPDAPAAEYLGERTTYRQLAGRAAGIAAELTRSGVRP
GAVVAVHTERGPGVLAAQLGVWLMGGVCLTLPSDLPRGRLETILTDAAPEAVVGGPHGGP
EAVAPGEPRVIDPAECAPAEPGALVPAGGGAYLIYTSGSTGVPKGVLVGHESFALLARWH
GGTYGVTPADRASSIAALSFDAFMWETWPYLCHGASVHFAPAELKLAPWELGDWYREQGI
GLSFLPTPLAEAYLRHGTHFGQLRCLLTGGDRLRLWDGHPLRRFVNHYGPTETTVVATSH
EVAPTSTGAVPIGRAIGPSRTMVVDGERETAPGAAGELLVGGACLALGYWGNPAATGRSF
VRLTGSGDRWYRTGDLVRRNDEGELEFLGRIDRQIKVRGVRVEPGEIEAVLGRCPGVSDV
VVDWDQDAARLTAYVVGGADGGDAHAASALTGFARRQLPAEMVPQHYVFLDRIPMTAHGK
VDRTALVRTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgtgacacaccggaacggcgccggctcggttccggagatggtcctggcccag
gcacgccggcagccggacgcgccggccgcggagtacctgggcgagcggaccacgtaccgc
caactggccggacgggccgccggaatcgccgccgaactgacccggagcggggtccggccg
ggcgcggtggtcgcggtccacacggagcgcggccccggcgtgctcgccgcccagctcggc
gtctggctcatgggcggcgtctgcctcacgctgccctccgacctgccccgcggccggctg
gagacgatcctgaccgacgccgccccggaggccgtcgtcggcggcccccacggcggaccg
gaggccgttgcgcccggtgagccgcgggtgatcgaccccgcggagtgcgccccggcggaa
cccggggcgctggtcccggccggcggcggcgcctacctcatctacacgtcgggctcgacc
ggggtccccaagggggtgctggtcggccacgagtccttcgcgctgctggcgcgctggcac
ggcggcacctacggcgtgacacccgccgaccgggcctcgtcgatcgcggcgctgtcgttc
gacgcgttcatgtgggagacctggccgtacctctgccacggcgcgtcggtccacttcgcg
cccgcggaactgaagctggcgccctgggaactcggtgactggtaccgcgagcagggcatc
ggcctgtcgttcctgccgactccgctggcggaggcgtacctgcgtcacggcacccacttc
gggcagctgcggtgcctgctgaccggtggggaccggttgcgcctgtgggacggtcatccc
ctgcggcgcttcgtcaaccactacggccccacggagacgacggtcgtcgccaccagccac
gaggtggcgccgacgagcaccggtgccgtcccgatcggccgggcgatcggcccgtcccgc
accatggtggtcgacggcgagcgggagaccgcgcccggcgcggccggggaactcctcgtc
ggcggggcgtgcctggcactcgggtactgggggaacccggcggcgaccgggaggagtttc
gtccgcctcaccggatccggcgacaggtggtaccgcacgggtgacctcgtgcgccggaac
gacgagggcgagctggagttcctcgggcggatcgaccggcagatcaaggtgcggggcgtg
cgggtggagccgggggagatcgaggcggtgctgggccgctgccccggggtgagcgacgtc
gtggtcgactgggaccaggacgcggcacgcctcaccgcctacgtggtcggcggggcggac
ggcggcgacgcccacgcggcatcggcgctcaccgggttcgcccgccggcagctgcccgcc
gagatggtgccgcagcactacgtcttcctcgaccggatccccatgacggcccatgggaag
gtcgaccggacggcactcgtgcgcactccctga
DBGET
integrated database retrieval system
