Sinocyclocheilus rhinocerous: 107709996
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Entry
107709996 CDS
T04916
Name
(RefSeq) thyroid hormone receptor alpha-A isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107709996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107709996
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
srx03310
]
107709996
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107709996
Nuclear receptors [BR:
srx03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
107709996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107709996
NCBI-ProteinID:
XP_016370152
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All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MEHKEQELNLPEGDETRWPNGVKRKRKNSQCSMKSTSVNIISVPGYVPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFKKCI
SVGMAIDLVLDDSKRVAKRRLIEENRERKKKEEIVKTLHNRPEPTVSEWELIRMVTEAHR
HTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVSREQLKNGGLGVVSD
AIFDLGKSLSQFNLDDSEVALLQAVLLMSSDRSGLACVEKVEKCQEMYLLAFEHYINHRK
HNISHFWPKLLMKVTNLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaagagcaggagcttaacctgccagagggagatgagacacggtggccgaat
ggagtgaagagaaaaagaaagaatagtcaatgctctatgaagagcacgtctgtgaacatc
atctctgttccagggtatgttcccagctacctggagaaagatgagccatgtgtggtatgc
ggggacaaggccaccggctaccattaccgctgcatcacatgtgagggctgcaagggtttc
tttaggaggacaatacagaagaatcttcacccttcctattcctgcaaatatgacagctgt
tgcatcattgataaaatcacccgcaaccagtgccagctgtgccgcttcaagaagtgcatc
tcggtgggcatggccattgacttggtgctggatgattcaaagcgtgtggccaagaggcgt
ctgatcgaggaaaaccgggaacggaaaaagaaagaggagattgtgaaaacactgcacaat
cggcctgagcccaccgtctcggagtgggagctgattcgtatggtgacggaggctcatcgt
cacaccaatgcccagggccctcactggaagcagaaacgcaagttcttaccagaagacatc
gggcagtctccagcccccacatcagacaacgacaaagtcgacctggaggccttcagtgag
ttcaccaagatcatcacccctgccatcacacgagttgtggactttgccaaaaagctgccc
atgttctctgagctgccctgtgaagaccagatcatcctgctgaaaggctgctgtatggag
atcatgtcgttgcgcgcagcagtgcggtacgacccggagagcgagacgctgaccctgagc
ggggagatggctgtcagtcgagagcagctgaagaacggagggttaggagtggtgtctgat
gccatctttgatttgggcaagagcctgtcacagttcaacctggatgactcagaggtggcg
ctgctgcaggctgtactgctcatgagctcagatcgttccggactcgcgtgtgtggaaaag
gtcgagaagtgtcaggagatgtacttgttagcattcgagcactacatcaaccatcgcaag
cacaacatctcacacttctggcccaagctgctgatgaaggtgacgaacctacgcatgatc
ggcgcctgtcatgccagccgcttcctgcacatgaaagtggagtgtcccacagaactcttc
cccccgctcttcctagaggtcttcgaggatcaggaggtgtga
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