Sinocyclocheilus rhinocerous: 107714608
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Entry
107714608 CDS
T04916
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107714608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107714608
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107714608
Chromatin remodeling factors
NuRD complex
107714608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
107714608
NCBI-ProteinID:
XP_016375982
LinkDB
All DBs
Position
Unknown
AA seq
1952 aa
AA seq
DB search
MSGNEDDRDHFGPMRDDDADEPISEAETPKSKKKKKAKKSRESRSSKRQKLLREDVPVSS
PEVMEAIRMVEGEEEEEDRVMRSESEGSDYAPSKKKKKRSSSSKERKKGGSAGEKAGGSS
GGKSKRKDPEPEEEDDDDDNDDGQEPKSSSQLLADWGMKDIDYTFTQEDYNSLTNYKAFS
QFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPMRGSASANAALAAANVAAAVESMVT
RVDGGGAAPMATPTSTAAPAAPPPSQQPPAVPLRKAKTKEGKGPNARRKTKSTPKPQDKK
SKAKKVAPLKIKLGNFKRKRSSSGEDDDGESDFDSFSISDGSNSRSSRSKSKKSKSSKKK
KMDEDADGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCEK
EGIQWEAREESSEGEEENDDGEVEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNP
PLPDIPNGEWICPRCLSLPLKGKVQKVLAWHWGEAPPPMPVPRPADLAADAPDPPPMIGR
KEREFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDMEEPPNLEMGAEGDEDKSC
KRKNKDPFYARIEDQYGRFGVKLEWLFIHRILNHSVDKKNNVHYLIKWRDLQYDQSTWES
EDMDIPDYETFKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQP
DYLDSTGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG
PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKKASK
MKKEASVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQH
KLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR
RLKADVFKHMPSKTELILRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLNVVMDLK
KCCNHPYLFPTAANEAPKMPNGMYDGSALTKASGKLMLLCKMLKKLKEGGHRVLIFSQMT
KMLDLLEDFLENDGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLA
TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTH
LVVRPGLGSKAGSMSKQELDDILKFGTEQLFKYELGEGDNKEEDSSVIHYDDKAIDRLLD
RNQDATDDTELQSMNEYLSSFKVARYVVKDEDEEEEDVDREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARHLGKGKRPRKPVNYNDCSQEDRGRRDWQDDQSDNQSDYSVASEEGDEDF
DERSEANSRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAVMRYGMPPQ
DTFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRI
GVMSLIRKKVQEFEHVNGQWSMPWMKELEESKRAAAIAAGEDPKTPSTGTPADTQPNTPA
PEDPSKSDDVKELEEKMEGDGEKETKGSRQEDEIIEIPDEGEKSPSPAKKEENKDRERET
TSPSAEKDGGSRDEENEKEGDKEKSTESKENTSSDVKAESSDATSSVDSSKTKEESEEKT
EKMDTCPGRDEKKELKDEKHGMKSEDSAKLQNGENAKETSGGVDGVSEEKKKAVKQRFMF
NIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIIHHGYARWQDVQNDPRF
AILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTEDPSHPSMAL
NTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARI
PPVAVRLQMSERSILSRLASRGPEVTQTQAPR
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaatgaagacgacagggaccattttggacccatgagagatgatgatgccgat
gaaccaatatcggaggcagaaactcccaaatccaaaaagaagaagaaagcaaagaaaagc
cgtgaaagcaggagcagtaaacgacagaaactcctcagagaggatgttcctgtcagctct
cctgaagtcatggaagcaatccggatggtagaaggtgaggaagaagaggaggacagagtg
atgcgatctgagagtgaagggagtgactatgctccaagcaagaagaagaaaaagagatcc
agctcctccaaggagagaaagaagggaggttcagctggagaaaaggctggtggctcatct
ggaggaaaaagcaaacgtaaagatccagagcccgaggaggaagatgatgacgatgataat
gatgatgggcaggagcccaaatcttcctctcagctattagcagactggggaatgaaagac
atcgactacacctttacccaggaggactacaactctctcaccaattacaaagctttcagt
cagtttgtcagacctttaatagctgctaagaaccctaagatcgctgtgtcaaagatgatg
atggttttgggggctaaatggcgagagttcagcactaataatcccatgcgaggctcagcg
agtgccaatgcagccctggcagctgccaacgtagctgctgcagtggagagtatggtgacc
agggtggatggaggaggggctgcgcccatggccacacccacatcaacagcagctcctgct
gcaccacccccatcccagcagcccccagcggtccccctgcgaaaagccaagaccaaagag
ggcaaaggaccaaatgcacgtagaaagaccaagtccaccccaaagccccaggacaaaaag
tctaaagcgaagaaagtggctccactcaagattaaactgggcaatttcaagagaaaacgt
tcatctagcggtgaggacgatgatggtgagagcgattttgacagtttctccataagtgat
ggatccaacagtcggagcagccgctccaagagtaaaaaatccaagagctccaagaagaag
aagatggatgaggatgctgacggctatgagactgatcatcaggactactgtgaggtgtgt
cagcagggtggtgagatcattctgtgtgacacctgtccgagagcctatcacatggtgtgt
ctagatcctgacatggagagagccccagagggcacatggagctgccctcactgcgagaag
gagggaattcaatgggaggctcgtgaggagagttctgagggtgaagaggagaatgatgat
ggagaggtagaagaggaggacgatcatcatatggagttttgtcgggtgtgtaaggatgga
ggagagctgctgtgctgtgacacatgcccctcgtcctatcacttacactgtctcaaccct
cctctgccagacatccccaacggagagtggatctgcccacgctgcctgagtcttccactg
aagggcaaagtccagaaagtcctggcctggcactggggtgaagcccctccccctatgccc
gtgccacgtcctgcagaccttgcagctgatgctccggatcctcctcctatgattggtcgg
aaggagagagagttctttgtgaagtggtgcaacatgtcttattggcactgttcatgggtc
caggaactacagttggagctgaactgtcaagtaatgttccgtaactaccagcggaagacg
gatatggaggagccccccaatttagagatgggtgcggagggagacgaggataagagctgc
aagagaaagaataaagatcccttttatgcccgtatagaggatcagtatgggcgctttgga
gtaaagttagagtggctcttcatccaccgcatcttaaaccacagtgtggataagaagaat
aatgttcactatcttatcaaatggagagatttgcagtatgatcagtcaacctgggagtct
gaagacatggacatcccagactatgagacctttaaacaacattactggaaccacagggag
ctgatgcttggagaggagggcagaccaggtaaaaagatgaagaaggtgaaagtgaggaag
acagagaggcctcctgctaatcctgtggtggatcccactataaagtttgataggcagccg
gattatctggactctactggcggcacgcttcacctgtaccagcttgagggactgaactgg
ttgcgtttttcttgggctcagggcacagacaccattctggctgatgagatgggtcttgga
aagacggttcagactgccgtcttcctctattcactctataaagagggtcattcgaagggg
ccgttcctggtcagtgcccctctatccaccatcattaactgggagagggaatttgagatg
tgggccccagacatgtatgtggttacttatgtgggtgataaagacagcagagctgtcata
cgagagaatgaattctcctttgagggcaacgccatccgtggtgggaagaaggcctccaaa
atgaagaaagaggcttctgtgaagttccatgtgctgttgacctcctatgagctgatcaca
atcgatcaagccatcctgggctccatcgactgggcttgtcttgtagtagacgaagcccat
agactgaaaaataaccagtcaaagttctttcgtgtgttgaataactaccctcttcagcat
aagctgctgttgacaggcacacctttacaaaacaacctggaggagctcttccatctgctc
aacttcctcacgcctgagagattcaataatctggaaggtttcctggaagaatttgccgac
atagctaaggaggaccaaattaagaaactgcacgacatgctgggtccacacatgctcaga
agactcaaagctgatgtcttcaaacacatgccctcaaaaacggaactcatcctgcgagtg
gagctcagccccatgcaaaagaagtactacaagtacatcttgacacgcaactttgaagct
ctgaacactcgtggaggaggaaaccaggtgtctctgctcaatgtggttatggacctaaag
aagtgctgtaaccacccctacctcttcccgacagctgctaatgaagcccctaaaatgccc
aatggcatgtatgatggcagtgccctcacaaaggcttctggaaaactgatgcttctgtgt
aagatgctgaaaaaactgaaggagggtggacatagagtgcttatattctcacagatgaca
aagatgttggatttgctggaagactttctggagaatgacgggtacaagtatgaaaggata
gacggaggggtgactggagggatgaggcaggaagccatcgatagattcaatgctcctggt
gctcctcagtttgttttcctcttgtccacccgagcagggggtttgggcatcaatttggca
accgctgacactgtcatcatctacgactctgactggaacccacacaacgacatccaggca
tttagcagggctcatcgtattggtcagaataagaaggtgatgatctatcgatttgtcact
aaagcatctgtggaggagagaattacacaggtggcaaagaaaaagatgatgttgactcac
ctggtggtgcggcctggtctgggctccaaggctggatccatgtccaaacaagaattggac
gacatcttgaagtttggcacagaacagcttttcaaatacgagcttggagaaggtgacaat
aaggaggaagatagcagtgtgatccactatgatgacaaggcgattgatcggttgttggat
cgaaaccaagatgcaacagatgacacagagctgcagagtatgaatgaatacctcagctct
tttaaagtggcccggtatgtggtcaaagatgaggatgaggaggaggaggatgtggataga
gagattattaagcaggaagagagtgtagatcctgattactgggagaaactgttgcgccat
cattatgagcagcagcaggaagatctcgctcgtcaccttggcaaaggcaaacggcctcgc
aaacctgtcaactacaacgactgctcacaggaggacagaggtagacgggactggcaggat
gatcagtctgataaccaatcagattactctgtggcttcagaggagggtgatgaggacttt
gatgagcgatctgaagctaactcccgaagaccaagtcgcaaaggcttgaggaatgataaa
gataaacccctgcctcctctactggccagagtgggaggaaacattgaggtgttgggcttc
aatgctcgacaaaggaaggccttcctgaatgcagtgatgcgttatgggatgcctccccaa
gataccttcaccactcagtggctcgttagagacctgcgaggcaaatcagagaaggagttc
aaggcatacgtgtccctctttatgcgtcacctgtgtgagccaggcgccgacggggcagaa
acatttgctgatggcgttccacgggaaggactgtcacgacaacatgttctcacacgcata
ggtgtaatgtcactgatccgcaagaaggtccaggagtttgagcatgtgaatggtcagtgg
tcaatgccctggatgaaagaactggaggaaagcaaaagagcggcagccattgcagcagga
gaagatccaaaaacgccctctactgggacgcctgcagatacccagcccaacacaccagca
ccagaagacccttccaagagcgatgacgtaaaagagctggaggagaagatggaaggggac
ggagagaaggagacgaaaggctccagacaggaggatgagatcattgagattcctgatgaa
ggtgagaaatcccccagtccagcaaagaaagaggagaataaggacagggagagagagacc
acctcaccatcagcagaaaaggatggaggaagcagagatgaagaaaatgaaaaggaggga
gacaaagagaagtccactgaatcgaaggaaaacacatcttcagatgtcaaagctgaaagt
tcagatgccacaagcagtgtagactcatccaaaaccaaagaagaatctgaagagaagaca
gaaaaaatggacacttgcccaggaagagatgagaagaaagagctgaaagacgagaagcat
ggcatgaagtcagaggactctgctaagctgcaaaatggagagaatgccaaagagacaagt
ggaggagtggatggagtgagtgaggagaagaagaaagcagtgaagcagaggttcatgttt
aacatcgctgacggaggtttcacagagcttcactctctctggcagaatgaagagagagcc
gccacggtcacaaagaagacttacgagatctggcatcgtcgccatgactactggctgctg
gctggtatcatacaccacggttacgcacgttggcaggatgtacagaatgacccgaggttc
gccatcctcaatgagccctttaagggagagatgagcagaggaaacttcctcgagattaag
aacaagtttcttgctcgcaggtttaagctgttggaacaagctctggtgatcgaggagcag
ctcagacgtgctgcatatctaaacatgacagaggacccctctcacccctccatggcactc
aacacacgcttcagtgaggtggagtgtttggcagagtcacaccagcacctcagtaaagag
tccatgtcaggaaacaagcctgctaatgcagttctacacaaagttctcaaacaactggag
gagctactcagcgacatgaaggcagatgtcacccggctcccggcaaccatcgctcggatt
ccgcccgtcgctgtgcggctgcagatgtcagaaagaagcatccttagccggttggccagc
cgtggaccggaggtcacacagacgcaggcgccacgctga
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integrated database retrieval system
