Sinocyclocheilus rhinocerous: 107724784
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Entry
107724784 CDS
T04916
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107724784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107724784
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107724784
Chromatin remodeling factors
NuRD complex
107724784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
zf-HC5HC2H_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
107724784
NCBI-ProteinID:
XP_016389302
UniProt:
A0A673LUL9
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MSGSEDDRDHFGPMRDDDANEPTSATETPRSKNKKKKAKKSRESRSSKRQKLLREDVPVS
SPEVMEAIRMVEGEEDEEDRVMRSESEGSDYAPSKKKKKRSSSSKERKKGGSVGEKVGGS
SGGKSKRKDPEPEEEDDDDDDDGQEPKSSSQLLADWGMKDIDYTFTQEDYTSLTNYKAFS
QFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPMRGSASANAALAAANVAAAVESMVT
RVDGGGAVPMATPTSAAAPAAPPPSQQPPAVPLRKAKTKEGKGPNARRKTKSTPKPQDKK
SKAKKVAPLKIKLGNFKRKRSSSGEDDDGESDFDSFSISDGSNSRSSRSKSKKSKSSKKK
KMDEDADGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCEK
EGIQWEAREESSEGEEENDDGRRDDGEVEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHL
HCLNPPLPDIPNGEWICPRCLSPPLKGKVQKVLAWRWGDAPPPMPVPRPADLPADAPDPP
PMIGRKEREFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDMEEPPNLEMGAEGD
EDKSCKRKNKDPFYARIEDKYGRFGVKLEWLFIHRILNHSVDKKNNVHYLIKWRDLPYDQ
SAWESEDRDIPDYETYKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIK
FDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKE
GHSKGPFLVSAPLSTIINWEREFEMWAPDIYVVTYVGDKDSRAVIRENEFSFEDNAIRGG
KKASKMKKEASVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNN
YPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLG
PHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLNV
VMDLKKCCNHPYLFPTAANEAPKIPNGMYDGSALTKASGKLMLLCKMLKKLKEGGHRVLI
FSQMTKMLDLLEDFLENDGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGL
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKK
MMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKVELGEGDNKEEDSSVIHYDDKAI
DRLLDRNQDATEDTELQSMNEYLSSFKVAQYVVKDEEEEEEDVDREIIKQEESVDPDYWE
KLLRHHYEQQQEDLARHLGKGKRPRKPVNYNDCSQEDRGSRRDWQDDQSDNQSDYSVASE
EGDEDFDERSEANSRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAVMR
YGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ
HVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMKELEESKRAAAIAAGEDPKTPSTGTPADT
QPNTPTPEDLSKSDDVKELEEKMELDGEKETKGSRQEDEIIEIPDEGEKSPSPAKKEENR
DRERETTSPSAEKDGGSRDEENEKDGDKEKSTELKENTSSDLKAESSEATSSVDTSKTKE
ESEEKTEKMDTSPARDEKKELKDEKDCVKSEDSAKLQNGENVKETSGGGDGVSEEKKKAV
KQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIIHHGYARWQDV
QNDPRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTEDPS
HPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKADVTRLP
ATIARIPPVAVRLQMSERSILSRLASRGPEVTQTQAPR
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagtgaagacgacagggaccattttggacccatgagagatgatgatgccaat
gaaccaacatcagcgacagagactcccagatccaaaaacaagaagaagaaagcaaagaaa
agccgtgaaagtaggagcagcaaacgacagaaactcctcagagaggacgttcctgtaagc
tctcctgaagtcatggaagcaatccgaatggtagaaggtgaggaagacgaggaggacaga
gtgatgcgatctgagagtgaagggagtgactatgccccaagcaagaagaagaaaaagaga
tccagctcctccaaggagagaaagaagggaggttcagtgggagaaaaggttggtggctca
tctggaggaaaaagcaaacgtaaagacccagaacctgaggaggaagatgatgacgatgat
gatgatggtcaggaacccaaatcttcctctcagctgttagcagactggggaatgaaagac
atcgactacacctttacccaagaggactacacctctctcaccaattacaaagctttcagt
cagtttgtcagacctttaatagctgctaagaaccctaagattgctgtgtcaaagatgatg
atggttttgggggctaaatggcgagagttcagcactaataatcccatgcgaggctcagcg
agtgccaacgcagccctggcagctgccaacgtagctgctgcagtggagagtatggtgacc
agggtggatggaggaggggctgtgcccatggccacgcccacatcagcagcagctcctgct
gcaccacccccatcccaacagcccccagcggtccccctgcgaaaagccaagaccaaagag
ggcaaaggcccaaatgcacgtagaaagaccaagtccaccccaaagccacaggacaaaaag
tctaaagcgaagaaagtggctccactcaagattaaactgggcaatttcaagagaaaacgc
tcatctagcggtgaggatgatgatggtgagagcgattttgatagtttctccataagtgat
ggatccaacagtcggagcagccgctccaagagtaagaaatccaagagctccaagaaaaag
aagatggatgaggatgctgatggctatgagactgatcatcaggactactgtgaggtgtgt
cagcagggtggcgagatcattctgtgtgacacctgtccgagagcctatcacatggtgtgt
ctagatcctgacatggagagagccccagagggcacatggagctgcccccactgtgagaag
gagggaattcaatgggaggctcgtgaggagagttctgagggtgaagaggagaacgatgat
ggaaggagggatgatggagaggtagaagaggaggacgatcatcatatggagttttgtcgg
gtgtgtaaggatggaggagagctgctgtgctgtgacacatgcccctcgtcctatcactta
cactgtctcaaccctcctctgccagacatccccaacggagagtggatctgcccacgctgc
ctgagtcctccactgaagggcaaagtccagaaagttctggcctggcgctggggtgatgcc
cctccccctatgcccgtgccgcgtcctgcagaccttccagccgatgctccggatcctcct
cctatgattggtcggaaggagagagagttctttgtgaaatggtgcaacatgtcttattgg
cactgttcttgggtccaggaactacagttggagctgaactgtcaggtaatgttccgtaac
taccagcggaagacagatatggaggagccccccaatctagagatgggtgctgagggagac
gaggataagagctgcaagaggaagaataaagatcccttttatgcccgtattgaggataag
tatgggcgctttggagtaaagttggagtggctcttcatccaccgcatcttaaaccacagt
gtggataagaagaataacgttcactatctgatcaaatggagagatctgccatatgatcag
tcagcctgggagtctgaagacagggacatcccagactatgagacctataaacaacattac
tggaaccacagggagctgatgcttggagaggagggcagaccaggtaaaaagatgaagaag
gtgaaagtgaggaagacagagaggcctcctgctaatcctgtggtggatcccactataaag
tttgataggcagccggattatctggactctactggcggcacgcttcacccataccagctt
gagggactgaactggttgcgtttttcttgggctcagggcacagacaccatcctggctgac
gagatgggtctcggaaagacagttcagactgctgtcttcctctactcgctctacaaagag
ggtcattcgaaggggccgttcctggtcagtgcccctctgtccaccatcattaactgggag
agggagtttgagatgtgggccccagacatatatgtggtcacttatgtgggtgataaagac
agtcgagctgtcatacgagaaaatgaattctcctttgaggacaacgccatccgcggtggg
aagaaggcctccaaaatgaagaaagaggcttctgtgaagttccatgtgcttttgacctct
tatgagctgatcacaatcgatcaagccatcctgggctccatcgactgggcttgtcttgta
gtagacgaagcccatagactgaaaaataaccaatcaaagttctttcgtgtgttgaataac
taccctcttcagcataagctgctgttgacaggcacacctttacagaacaacctggaggag
ctcttccatctgctcaacttcctcacgcccgagagattcaataatctggaaggtttcctg
gaagaatttgctgacatagctaaagaggaccaaattaagaaactgcacgacatgttgggt
ccacacatgctcagaagactcaaagctgatgtcttcaaacacatgccctcaaaaactgaa
ctcattgtgcgagtggaactcagccccatgcaaaagaaatactacaagtacatcttgaca
cgcaactttgaagctctgaacactcgtggaggaggaaaccaggtgtctctgctcaatgtg
gttatggacctaaagaagtgctgtaaccacccctacctcttcccaacagctgctaatgaa
gcccctaaaattcccaatggcatgtatgatggcagtgccctgacaaaggcttctgggaaa
ctgatgcttctgtgtaagatgctgaaaaaactaaaggagggtggacatagagtgcttata
ttctcacagatgacaaagatgttggatttgctggaagactttctggagaatgatgggtac
aagtatgaaaggatagatggaggagtgactggagggatgaggcaggaggccatcgataga
ttcaatgctcctggtgctcctcagtttgttttccttttgtccaccagagcagggggtttg
ggcatcaatttggcaaccgctgacactgtcatcatctacgactctgactggaacccacac
aacgacatccaggcatttagcagggctcatcgtattggtcagaataagaaggtgatgatc
tatcgatttgtcactaaagcatccgtggaggagagaattacacaggtggcaaagaagaag
atgatgttgactcacctggtggtgcggcctggtctgggctccaaggctggatccatgtcc
aaacaagaattggatgacatcttgaagtttggcacagaacagcttttcaaagtcgagctt
ggagaaggtgacaataaggaggaagacagcagtgtgatccactatgatgacaaggcgatt
gatcggttgttggatcgaaaccaagatgcaacagaggacacagagctgcaaagtatgaat
gaatacctcagctcttttaaagtggcccagtatgtggtcaaagatgaggaagaggaggag
gaggatgtggatagagagatcattaagcaggaagagagtgtagatcctgattactgggag
aaactgttgcgccatcattatgagcagcagcaggaagatctcgctcgtcacctgggcaaa
ggcaaacggccacgcaaacccgtaaactacaacgactgctcacaggaggacagaggtagt
agacgggactggcaggatgatcagtctgataaccaatccgattactctgtggcttcagag
gagggtgatgaggactttgatgagcggtctgaagctaactcccgaagaccaagtcgcaag
ggcttgaggaatgataaagataaaccactgccccccctactggccagagtgggaggaaac
attgaggttttgggcttcaatgctcgacaaaggaaggctttcctgaatgcagtgatgcgt
tatgggatgcctccccaggatgccttcaccacccagtggcttgttagagacctgcgaggc
aaatcagagaaggagttcaaggcatatgtgtccctctttatgcgtcacctatgtgagcca
ggtgcagatggggcagaaacatttgctgatggcgttccacgggaaggactgtcacgacaa
catgttctcacgcgtataggtgtaatgtcactgatccgcaagaaggtgcaggagtttgag
catgtcaatggtcaatggtcaatgccctggatgaaagaactggaggaaagcaaaagagcg
gcagccatcgcagcaggagaagatccaaaaacgccctctactggaacgcctgcagatacc
cagcccaacacaccaacaccagaagacctttccaagagcgatgacgtaaaagagctggag
gagaagatggagctggacggagagaaggagacaaaaggctccagacaggaagatgagatc
attgagattcctgatgaaggtgagaaatcccccagtccagcaaagaaagaggagaatagg
gacagggagagagagaccacctcaccatcagcagaaaaggatggaggaagcagagatgaa
gaaaatgaaaaggatggggacaaagagaagtccactgaattgaaggaaaacacgtcttca
gatctcaaagctgaaagttcagaagccacaagcagtgtagacacatccaaaaccaaagaa
gaatctgaagagaagacagaaaaaatggacactagcccagcaagagatgagaagaaagag
ctgaaagacgagaaggactgcgtgaagtcagaggactccgctaagctgcaaaatggagag
aatgtcaaagaaacaagcggaggaggggatggagtgagtgaggagaagaagaaagcagtg
aagcagaggttcatgtttaacattgctgatggaggtttcacagagcttcactctctctgg
cagaatgaagagagagccgccacggtcaccaagaagacttacgagatctggcatcgtcgc
catgactactggctgctggctggtatcatacatcacggctacgctcgttggcaggacgta
cagaatgacccgaggttcgccatcctcaatgagccctttaagggagagatgagtagagga
aacttccttgagattaaaaacaagtttcttgctcgcaggtttaagctgttggaacaggct
ctggtgatcgaggagcagctcagacgtgctgcgtatttaaacatgacagaggacccctct
cacccctccatggcactcaacacacgcttcagtgaggtggagtgtctggcggagtcacac
cagcacctcagtaaagagtccatgtcaggaaacaagcctgctaatgcagttctacacaaa
gttcttaaacaactggaggagcttctcagcgacatgaaggcagatgtcacccggctcccg
gcaaccattgctcggataccgcccgtcgctgtgcggctgcagatgtcagaaagaagcatc
cttagccggctggccagccgaggaccggaggtcacacagacgcaggcgccacgctga
DBGET
integrated database retrieval system
