Sinocyclocheilus rhinocerous: 107738419
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Entry
107738419 CDS
T04916
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04260
Cardiac muscle contraction
srx04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107738419
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107738419
04261 Adrenergic signaling in cardiomyocytes
107738419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107738419
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107738419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
VWA_CoxE
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
107738419
NCBI-ProteinID:
XP_016405674
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MMVRSRSTDLIMNPFRICVLMMFLFASVHISCPSQFPSPLVIKEWVDQLQQELVSLADTA
SAGNNLRQIFMDNQNYFTVKTNNAAQLVETAARNIENFLKKRAAALETLATAAENFQMEH
QWKDEFEEDDIVYYNAKDNLEANETEGRKNRIRPEFKEDPSFKNRLTSYNHTAVHIPTDI
YDGSTIVLNELNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFDHLVQANVRNKKILKDAVQNISAKGITNYTKGFEFAFDQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFSRYNIDRKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRA
GGSRSQHQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNP
KFQEPVTLDFLDAEQENDIKVQIRTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYNWAP
VNGTDYSLALVLPEYSLHYIEANLGDTIKQAMSFETMQQEKFEEYGYTFIAPREYCKDLK
VSSNNTQFLVDFNEYIDRKTPNGPLCNLTLVNRLLLDAGLTADLVKVWKEQNVDGVLAKF
VATDGGITRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIFTAPYVNKSRESGYESGIL
VSKAVDLDINGAKLKPAVVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDKQVDCVIL
DDGGFLLMSNQDEYITQIGQFFGEVDPVLMITLVNTSLFSFNKTYDYQSVCDPERETKAA
AGPRSIYVPTIADMLTVGWWASTAVWSVLQQLLLSLTLPNVMGTAYSEDDLSDAFSKESC
ITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFLISDAKSSCLSCDPKPLRQ
AEQPSTGPDPCVLAQNPRYRKGPDICFDNNADEDATDCGGGCSLSPSLWPMLGLQLLLLW
LLTGTRTYLS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgctcgagatcaacggatctgatcatgaatccgttcagaatctgcgtgctg
atgatgttcctcttcgcatctgttcatatctcgtgcccatcgcagttccccagtccgctc
gtgataaaagaatgggtagatcagctgcagcaggagctggtttctctagcagacacagcc
agcgctgggaataatctaagacagatctttatggataatcagaattatttcactgtgaaa
acaaataatgcggcacaacttgtggaaacagcggcacggaatatagaaaattttttgaag
aagcgagccgcagctctagagactttggcaaccgcagcagagaatttccaaatggagcat
caatggaaagatgaatttgaagaggacgatatagtttactataatgccaaggataatctt
gaagccaatgaaacagaaggaaggaaaaaccggatcagacctgaatttaaagaagaccca
tcattcaaaaaccgcctcacctcctacaaccatacagctgtgcatatccccacggacata
tatgacggctctaccattgtgttaaatgagctgaactggactgaagcattggaggatgtc
tttaagaaaaaccgagaagaggatccaacgctactatggcaagtgttcggcagcgctact
ggattagctcgctattacccagcttccccttggatggatgccaggaaaacacccagcaaa
atcgacctgtatgatgtgcgccggcgaccttggtatgttcaaggtgccgcttcgccgaag
gacatgctgattcttgttgatgcgagtggaagtgtgtctgggctgacccttaaattgatc
cgaacctctgtcagtgaaatgctggagacactttctgatgatgattatgtcaatgttgtc
cattttaacacaaaagtgaataacacagcgtgtttcgaccacctggttcaagctaacgtt
cgcaataagaagatcttaaaagatgcagtgcagaacatctcagccaagggcatcaccaac
tataccaaaggcttcgaatttgccttcgatcagctgtcaaatccaaacatcaccagagca
aactgcaacaagatcataatgttgtttactgatggaggcgaggagagggcagaggagatc
tttagcagatacaacattgacagaaaggtacgtgtgttcacattctctgtgggtcaacac
aactatgacactgggccaataaagtggatggcctgcgctaataagggatatttctacgaa
atcccatccattggagccattcgcataaacacacaggagtatctagatgttttgggcagg
ccgatggtccttgcagatgccaaacaggtgcagtggaccaacgtgtacctggatgctctg
gagttgggcctagtcatcactggcacgctacctgtgttcaacaagaccaaatccagggcg
ggcggatctcgaagccagcatcagaaccagttgattttaggagtgatgggggtggatgtg
tctctcgatgatatcaaaagactgacgccccgctttacaattggtcctaatggatattat
ttcgcaattgatcctaatggttacgtgctgctccatccaaacctgcaaccaaagaacccc
aaattccaagagcctgttacactggattttctggatgcggagcaggaaaatgatattaaa
gtccagatacggactctgatgattgatagagaccctggggagaaaacgatagaaacgctt
gttaaatctcaagatgagagatacattgatcgaggaatcaggacgtacaactgggcaccg
gtgaacgggacagactacagcctggccttggttttgcctgaatacagtctgcattacatc
gaggcaaacctgggggacactataaaacaagccatgtcctttgaaaccatgcagcaggag
aaatttgaggaatatgggtacacctttattgcacccagagaatactgcaaggacctcaaa
gtctcatccaacaacacccaatttctggtggatttcaatgagtacattgacaggaaaact
ccaaatggtcctctgtgtaatctcactcttgtaaaccggttgctgctggatgccggtctc
acggcagacctcgtaaaagtctggaaggaacagaatgtagatggagttttggccaagttt
gtggctacagatggaggcattacacgtgtgtatcctaaaagtgctggggaagaatggggt
gaaaactctgagacctatgactcaagtttttacaaaaggagtttggacaatgacatatac
atcttcaccgccccatacgtcaacaagagcagagagtctggttatgagtccggtatcctt
gtcagtaaagcagtggacttggacattaatggagcaaaactcaaacctgctgtggtggga
gtcaaactcaacgtatcggcctggatgaacagcttcataaacgctaccaccaagaaaaat
tgcaaggatgagatctgcgggtgcctcagaaatgataagcaagtggactgcgtgattctg
gatgatggcggctttctgctcatgtccaatcaggatgaatatatcacacagataggtcag
ttctttggtgaagtggaccctgttctgatgatcactctggtcaacacctcactgttctcc
tttaataaaacctacgactaccaatccgtctgcgacccggagagagaaactaaagctgct
gccggaccccgctctatatacgtgccaacaatcgcagatatgctgactgtaggctggtgg
gcctccactgcggtctggtcagttctgcagcagctacttctcagtctgactctcccaaat
gtaatgggaacagcgtactcggaggatgacctctcggatgcgttctccaaagagagctgt
atcaccgaacagacgcagtatttctttgagaacgagaacaaatctttctctggagctatg
gactgtggaaactgctccagaatgtaccgggcggagaagctcccaaacacgaatttggta
tttttgatctctgacgcaaagagttcctgcctctcctgcgatcccaaaccactgagacaa
gccgaacagccctctactggtcctgatccgtgtgtgctggcccagaaccctcggtacagg
aaaggaccggacatctgctttgacaacaacgcggatgaggacgcgactgactgtggtggt
ggctgcagtttgagtccgtctctctggccgatgttgggtcttcagctccttctactctgg
ctgcttactggaaccagaacctatttgtcctga
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integrated database retrieval system
