Sinocyclocheilus rhinocerous: 107757338 Help Entry 107757338         CDS       T04916                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism srx  Sinocyclocheilus rhinocerous Pathway srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     107757338  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107757338 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107757338 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Laminin_G_1 SR-25 PRTRC_E Motif Other DBs NCBI-GeneID:  107757338 NCBI-ProteinID:  XP_016430266 LinkDB All DBs Position Unknown AA seq 1839 aa AA seqDB search MRRLKETALCAIVPLLLSLCTTTHAANLINVLRVLELSEDMEGVSVEAGLCIERKDTSET DMAYRIDKKIQLSAPTKQFFPDSAFPENFSLMTTVKAKKNSQFFLVSLYDEQGVQQLGLE MGRSPVFLYEDHQGQPAPDLYPIFKKINLADGKWHRIAYSVEGKSVTLYLDCKKVQTLEL MRGDSPVVSTDGVVVFGTRLLDEEVFEGEIQQLLLVDDPQAAADYCQDYIPDCDSPLPYS TQSLAPEEAKLIHNLDDIMQGDEPVEPKKRSKKDTKGKKKKKKRDKKGKKESRKKKKEAE ALEEGFLEVSSKLPEYLAQEPHRRTLPAATEQPNPPVTEQPKSIVQSSPTTTVDLMDSIP DMPTHEPDTYQGELTIATTKPVTDHEDQSVLATAVSESPNMEVEEERPIKTPEVEEFSDD LYSDEHNELLVSTVTVGPNITDYEILENDEFQNGSNSFEQEYEEYEVYEDRFDPAEREMP GTWDGKGRRFDKGQKGEPAVVEPGTYFQGPPGPPGPQGLPGILGITGPPGPSGDPGDMGP EGRPGLPGADGIPGPPGTLLMLPFQYGVDSQKGPVISAQEAQAQAILQQTKLSLKGPPGP LGLTGRPGPVGDRGFDGLPGLPGNKGHRGDRGKPGPQGPPGEPGHKGSDGPVGPRGQPGE PGLRGLVGSRGPPGPPGQQGIQGVNGVQGAKGNLGPPGEPGPPGQQGNPGIQGFPGPQGP IGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPAGEKGHQGLSGAQGPVGYPGPRGVKGA DGVRGLKGSKGEKGEDGFPGAKGDMGIKGDRGDTGAPGNHGEDGPEGLKGQSGPMGEPGS AGIAGEKGKLGVPGLPGYPGRQGSKGSVGFPGTAGVEGEKGKRGPAGQTGPDGERGPNGA RGGRGARGPTGKPGAKGSAGHDGPQGAAGERGPQGPQGRDGEAGPKGPNGPPGKDGLPGH PGQRGEPGFQGKTGPPGPAGVIGPQGKTGETGPTGDRGHPGAPGPPGEQGLPGVTGKEGA KGDPGPAGLPGKSGPAGRHGFRGERGLPGTLGTAGLKGGEGPPGVAGPIGATGERGPAGP AGAIGQPGRTGGVGPPGPMGEKGDPGEKGSFGPAGRDGEQGPVGLPGPAGSPGPPGEDGD KGETGGPGQKGSKGDKGEGGPPGPPGSQGPPGQPGAPGLDGEPGPRGQQGMYGPKGDEGP RGFKGANGPPGLQGMPGPPGEKGESGHVGAMGPPGQHGPRGPQGPIGGEGPQGMPGGVGQ PGMVGEKGEDGEAGNPGNVGETGPPGEKGEVGEKGDTGPPGAAGPPGIRGTPGSDGPKGN PGPLGFPGDAGPPGEPGANGIDGGPGAKGDNGEPGKAGPPGASGEPGPQGPPGRRGHVGP EGKEGKQGKKGAKGSAGAEGPMGKTGPVGPQGHPGNPGPEGLRGIPGSAGEQGLNGPPGQ TGPPGPMGPAGLPGLKGDPGIKGDKGHVGLIGLIGPPGEMGEKGDRGLPGNQGVQGPKGN GGVSGPSGPTGPPGPPGLSGAIGEKGSKGDQGAFGARGDPGPAGPPGLPGPPATMIEPLP IREGRKKRRRHPNRQGARVREESEDEEAVQLNMEDFLQADESLDDPEGMEEVFASLNSMK TEVELMRKPLGTFESPARTCKELMLCHPEYKDGEYWIDPNQGCHRDSIKVFCNFTAEGET CLHPDKRFEMVKLAAWNKEKPGSWYSQYRKGKQFSYIDTDGNPVPVVQLTFLKLLSATAT QTFTYSCQNSVGWYDVASHSHQHAVRFRGSNDEEMTQAKSPFITSLHDGCQTRKGQERTV LQIDSSRSELLPVIDVAVSDFGNNNQKFGFHVGPVCFNG NT seq 5520 nt NT seq  +upstreamnt  +downstreamnt atgaggcggctgaaggagactgcgctctgcgcgatagtgccgctgcttctctctctgtgc acaacgacgcatgcagctaatctgatcaatgtattacgggtactggagctgtctgaagac atggagggagtgtcagtggaggccggcctgtgcatcgaaagaaaggacacatcagaaaca gacatggcttacaggatagacaaaaagattcaactcagtgccccaactaaacaattcttt ccagattctgctttccctgagaacttctctctgatgaccactgtcaaggctaagaaaaac tctcaattcttcctggtgtctttgtatgatgagcagggagtccaacagctggggctggag atgggccgatcgcctgtattcctctatgaagaccaccaaggccagccagctccagatctc taccccatttttaagaaaatcaatctggctgatgggaaatggcatcggatagcctacagc gtggagggcaagtctgttacactgtacctggactgtaagaaggtgcagacgctggaattg atgcgtggagacagccctgtggtcagcacggatggagtcgttgtttttgggacgcggttg ctagatgaggaagtatttgagggtgagatccagcagctcttgctcgtggatgatcctcag gctgcggctgactactgccaagattacattcccgattgtgacagcccgttgccctacagt acccagagtctggctcctgaagaggccaaactcatccataaccttgatgacatcatgcag ggagacgaacctgtggaaccaaagaaacgctcaaaaaaagacaccaaaggcaaaaagaag aagaaaaagagagataagaaaggcaaaaaagaatcccgtaagaagaaaaaggaagctgaa gctcttgaagaaggtttccttgaggtgtcctctaagctgccggagtatttggctcaagaa cctcatcgaagaactttaccagctgcaacagagcagccaaatccacctgtgacggagcag cccaagtcaatagtacaatcatctccaacaacaacggtcgatctgatggactccataccc gacatgcccactcatgaacctgacacctatcagggcgaactcaccatagccactacaaag cctgtgacagatcatgaggaccagtctgtgttggcaactgcagtttctgagtccccaaat atggaggtggaggaagagaggccgattaaaacaccagaggttgaggagtttagtgatgac ctttacagtgatgaacacaatgagctcttggtctccacagtgacagttgggcccaatatc acagactatgagatcttggagaatgatgagtttcaaaatggctcgaacagctttgaacag gaatatgaggaatatgaggtttatgaggaccgatttgacccagcggagagggagatgccg ggcacatgggatggaaagggcaggcgatttgacaaaggacagaagggagagccagctgtt gttgaaccaggcacatattttcaaggacctcctggcccaccaggaccacaaggtcttcca ggaatccttggcatcacaggccccccgggacccagtggagacccaggtgatatgggtcct gagggacgtccagggctgcctggcgctgatgggataccaggtcctccaggcactttgctt atgttacccttccagtatggagtagactctcagaagggacctgtgatatctgctcaagag gcgcaggctcaagccatcttacaacagaccaaactatcattgaagggccctccaggtcca ttaggtctcacagggaggccaggcccagtgggtgacaggggctttgatggactacctggt cttccagggaacaaaggacatcgaggagacaggggaaaaccaggaccccaaggtccacct ggagagcccggtcataagggttcggatggacctgttggaccaagagggcaaccgggagaa cctgggctaagaggacttgtggggtcaagagggccacctggtccacctgggcagcaagga attcaaggcgtcaatggtgttcaaggggcaaagggcaacttgggaccacctggtgaacct ggacctccaggtcaacaggggaacccaggcatacagggcttccctggtccacagggacct ataggcctgccaggagagaagggccctgagggcaaacctggaatgcagggccttcctggg attgatggtcctcctggtcatcctggaagagagggacccgctggggagaagggacaccag ggtttatcaggagcacaagggccggttggatatcccgggccccgtggagtcaagggtgca gatggggtgaggggactgaagggtagcaagggggagaagggtgaagatggtttcccaggg gccaagggtgacatgggtatcaagggagacagaggtgatactggggctcctggaaatcat ggtgaagatggaccagaggggctgaagggtcagtcaggacccatgggagagcccggatct gcaggcattgctggagaaaagggcaaacttggagttccaggattgcctggatatcccggc aggcaaggctctaagggatcggtgggctttcctggaacagctggggtggaaggagagaaa ggaaagaggggtccggctggacagactggtcccgatggtgaaagaggtccaaatggtgca cgtgggggaagaggagcaagaggaccgacaggaaagcctggagccaagggctctgctggt catgacggtccacaaggtgccgcaggagagagaggccctcaaggtccacaaggacgcgat ggagaggccgggccaaagggaccaaacggccctccaggaaaggacgggttgccaggtcac ccaggccaacggggagagccaggttttcaaggaaagactggtccccccgggcctgctgga gtgattggcccacagggaaaaactggggagactggtcccactggagacaggggacatccg ggtgccccaggaccccctggagagcaaggtctgccaggagtcacaggcaaagagggagcc aagggagatccaggccccgcagggctgcccgggaagagtggtcctgctgggcgtcatgga ttcagaggagaaagaggcttacctggcactctgggtactgctggtctgaagggtggggaa ggcccccctggtgttgcaggaccaattggtgccacaggagaaagaggacctgctggacct gcaggtgccattggtcagcctggtcgtacgggaggtgttggcccccctgggccaatggga gagaagggcgacccgggtgagaaaggttcatttggtcctgctgggcgagatggagaacaa gggcctgtgggattacctggtcctgcagggtcacctggtccacctggagaggacggagat aagggggagacaggaggaccagggcagaaaggcagcaaaggagacaagggagaggggggt cccccagggccacctgggagccaaggacctcctggacagccaggagcaccaggtctggat ggagagccagggccccggggacagcaaggaatgtacggccctaaaggagatgaaggtcct cgcggttttaaaggggcaaatggaccaccagggttgcagggaatgccaggacccccagga gagaagggagagagtggccatgttggagctatgggccctccaggacaacatggcccacgt ggcccccagggacccattgggggagagggtcctcagggcatgccgggcggagtgggccag ccaggaatggtgggagaaaagggtgaggatggagaagcagggaatccaggaaatgtgggc gaaactggcccccctggagagaaaggtgaagtgggtgagaagggtgatactggcccccct ggagctgcaggacccccaggaatcagaggcacacctggatcagatggacccaaaggaaac ccaggtccccttggatttcctggagatgcgggaccccctggagagccaggtgctaatggt attgatggtggtccaggagctaaaggggataatggcgaacctggtaaagctggaccccca ggagcctcaggagagcctggccctcaagggccacctggacggaggggtcatgtaggtcct gagggaaaagaagggaaacagggaaaaaagggggcaaagggttctgctggtgccgagggt ccaatgggaaaaacagggcctgtcggaccacagggacaccctggaaaccctggtccagag ggtttgcgtgggattccaggctctgctggagagcaagggttaaatgggcccccagggcaa acgggacccccaggacctatgggtccagctggattaccaggactgaaaggagatcctggc attaaaggagataagggtcatgttgggctgattggacttattggaccaccaggagaaatg ggagagaaaggagatcgaggcctgccaggaaatcagggagtacaaggccccaaaggaaat ggtggtgtttctggtccctctggcccgactggtccacctggaccccccgggttgtctggt gcaataggtgagaaaggatctaaaggagaccagggagccttcggtgcaagaggagatcca ggacctgctggcccacctggactacctggcccaccagccaccatgatcgagcctctgcca atcagagagggacgtaaaaagcgaaggagacatccaaaccgacaaggagccagagtcagg gaagagagtgaggacgaggaagcagtccagctcaacatggaggatttcctacaggcagac gagtccctggatgacccagaaggcatggaggaggtgttcgcttcactcaactcaatgaaa acagaggtggagctcatgagaaaaccactcgggaccttcgagagtcctgcccgcacatgc aaggagctgatgttgtgccatccagaatacaaagatggtgaatattggattgacccaaac caaggctgccatcgagactccattaaggttttctgcaacttcactgcggagggggagacc tgtctgcaccctgataaacgatttgaaatggtaaagctggccgcctggaacaaagaaaaa ccgggcagttggtacagccagtacagaaagggcaaacagttctcctatattgacactgat ggaaatccagtgcctgtggtccagctgaccttcctgaagctcctcagtgccacagctacg cagaccttcacctatagctgccagaactccgtcggctggtacgacgtggcgagccacagc catcaacatgccgtacggttccgcggcagcaacgacgaggaaatgacgcaagccaaatcg ccctttatcacatcactgcatgatggttgtcagacacgtaagggccaagagagaaccgtg ctgcagattgactcgtcgcgatcagagcttcttccagtcatagatgtagcagtatcagac tttgggaataacaaccagaagtttggcttccatgttggaccagtgtgttttaatggataa

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