Serratia plymuthica S13: M621_16385
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Entry
M621_16385 CDS
T02716
Symbol
lacZ
Name
(GenBank) beta-D-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00052
Galactose metabolism
sry00511
Other glycan degradation
sry00600
Sphingolipid metabolism
sry01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
M621_16385 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
M621_16385 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
M621_16385 (lacZ)
Enzymes [BR:
sry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
M621_16385 (lacZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
AGP45157
UniProt:
S4YID1
LinkDB
All DBs
Position
complement(3429296..3432415)
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AA seq
1039 aa
AA seq
DB search
MKQPLYSVNDNPPDSVLPQVLARQDWQNPAVTHLNRLPAHPQFRSWRALEEARDNRRSDR
RISLDGEWQFVYLNRPEAADPRWLVADGPDSRAVTVPSNWQMDGYDAPIYTNVRYPISTE
PPFVPQENPTGCYSREIDIPEAWLKAGKTRIIFNGVNSAFHLFCNGVWIGYSQDSRLPAE
FDLTDALHAGGNRICAMVMRWSSGTWLEDQDMWRMSGIYRSVSLLHKPDTHLTDFQLAAG
LDTEYRHGTLQASVHVAAGKAQPAGLQVELSLWRGDEKIAGQRKPLGTEAIDERGAYADR
VTFALPVQAPDLWSAELPHCYRAVIALYGADGELIEAEAADTGFRRVEITDGLLKVNGKP
LLIRGVNRHEHHPQRGQAINEEDMIQDILLMKQNNFNAVRCSHYPNNPRWYELCDRYGLY
VVDEANIETHGMVPMARLSDDPSWFPAYSARVTRMVQCNRNHPSIIIWSLGNESGHGSLH
DALYRWIKSSDPTRPVQYEGGGANSAATDILCPMYARVDEDQLIPGVPKWSIKKWVGMPG
ENRPLILCEYAHAMGNSLGDFDKYWRAFRQYPRLQGGFVWDWADQSLLKDDGNGLLAPAY
GGDFNDTPNDRQFCLNGLVFADRTPHPSLHEAKHAQQFFQFSLVGHAPLEVAVGSEYLFR
RTDNERLHWRIEQDGREWRSGEVALDLPPQGNAVVTLAERIDLPANARNVTLILEVIQPE
ATAWSSAGHRVAWQQFRLPTALALPDAPKPGVRPELQTHDDGYRVRHGEQQWFIDRNSGL
LTQWTVAGEDKLMSPFTDQFVRAPLDNDIGVSEVERIDPNAWVERWKKAGLYAMQRTCAQ
CTAAAYEDRVEIRSTFHYRYGDEVLIVSHWQMMIDGHGALKINVEGERAGHLPPLARIGM
VFQATPAAADVEWLGLGPHENYPDRQTSACFSRWRLPLSEMVTPYVFPTENGLRCNTQEL
NWGGWRVDGLFHFSIMPYGSKQLMDVDHWHLLRAEPGIWITLDAQHMGVGGDDSWTPSVH
EEWLLKETQWRYQVSVKHQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcctctttattcggtaaacgataacccgccggacagcgttctccctcaggtg
ctggcccggcaggactggcagaacccggccgtcacccacctcaacagattgcccgcccac
ccgcaatttcgcagctggcgcgcgcttgaagaggccagggataaccggcgttccgatcgg
cggatttcgctggatggcgaatggcagtttgtttatctgaaccgccccgaggcggcggac
ccgcgctggttagtggcggatggcccggatagccgggccgtaacagtgccttctaactgg
cagatggacggctatgatgcgccgatctacaccaacgtccgctacccgatctcgaccgag
ccgccttttgtgccgcaggagaacccgacggggtgctattcgcgcgaaattgacatccct
gaagcctggctgaaggctggcaaaacccgaatcatcttcaacggggtaaactcggcgttc
caccttttttgcaatggggtgtggattggctattcgcaggacagccgtttaccggccgag
ttcgatttaaccgacgcgctgcatgccggtgggaaccgtatctgcgcgatggtgatgcgc
tggagctcggggacctggcttgaggatcaagacatgtggcgcatgagcggcatttaccgc
tcggtgtcattgctgcacaagccggacacccaccttaccgattttcaactggccgccggg
ctggatacggagtatcggcacggcaccttgcaggcctcggtgcatgtcgcggcggggaaa
gcccagccggcggggctgcaggtggagttatccctgtggcgaggcgacgaaaaaatcgcc
ggccaacgcaagccgctgggcacggaggcgattgacgagcggggggcttatgccgatcgg
gtgacctttgcgttgccggtgcaggcgccggatttatggagtgccgagttaccccattgc
tatcgcgccgtcattgcgctttatggcgccgatggggagctgattgaagccgaggcggcg
gacaccggttttcgccgcgtagagataacggacgggctgctgaaagtgaacggcaagccg
ctgctgatccgtggcgtcaaccggcatgagcaccacccgcaacgcggccaggcgatcaat
gaagaggacatgattcaggatattctgctgatgaagcagaacaactttaatgccgtgcgc
tgttcgcattaccccaacaatccccgttggtacgagctctgtgaccgctacggtctttac
gtggtggatgaggccaatatcgaaactcacggtatggtgccgatggcgcggctgagtgac
gatccgagctggttcccggcttacagcgcccgcgtgacccgcatggtgcagtgtaaccgc
aaccatccttccatcatcatctggtcgttgggcaatgagtccgggcatggcagtttgcat
gatgcgctttatcgctggatcaaaagcagcgatcccacacggccggttcagtacgaaggc
ggcggggccaacagcgcggccacggatatcctttgcccgatgtatgcccgggtggatgaa
gatcaactcatccctggggtgccaaaatggtcgataaaaaaatgggtcggcatgccgggc
gaaaatcgcccgctgatactgtgcgaatacgcccacgcgatgggcaacagcctgggggat
tttgataagtactggcgggcgtttcgtcagtatccgcggctacagggcgggtttgtctgg
gactgggccgaccaatcgctgcttaaagacgatgggaatggcttgcttgcaccggcctat
ggcggcgacttcaacgacacgcccaatgaccggcagttctgcctgaacggcctggtattt
gccgaccgcacgccacacccttcgctccatgaagccaaacatgcgcagcagttcttccag
ttttcgttggtgggccatgcgccgctcgaggtggccgtcggcagtgaatacctgttccgc
cgtaccgacaatgaaaggctgcactggcgcattgaacaggatgggcgagaatggcggtcg
ggcgaggtggcgttggacctcccgccgcagggcaatgccgtcgtcaccctggcggaacgc
atcgatttgccggcgaatgcccgcaatgtcaccctgatccttgaagttatccagccggag
gccaccgcctggtcatcggccgggcatcgcgtcgcatggcaacaattccggctgccgacg
gcgctggcgttgccggatgcgccaaaacccggcgttcgccccgaactgcagactcatgac
gacggttatcgagtgcggcatggcgaacagcaatggtttatcgaccgcaacagcggtttg
ttgacgcagtggacggtggcgggtgaagacaagctgatgagcccgttcaccgaccagttt
gttcgcgcgccgctggataacgacattggggtcagtgaagtcgaacgaatcgaccctaac
gcctgggtggaacgctggaaaaaagccgggctttatgccatgcagagaacctgcgcccag
tgcacggcggcggcttacgaagaccgggtggagatccgcagcaccttccattaccgctat
ggcgatgaggtgctgatcgtcagccactggcagatgatgattgatggccacggcgcgctg
aagatcaacgtcgaaggggagcgcgccggccatttgccgcctctggcgcgcatcggcatg
gttttccaggccacaccggcggcggcagacgtggagtggttagggttggggccgcatgag
aactaccccgaccgccaaacaagtgcttgtttctcacgctggcgcctgccgttgagcgag
atggtcaccccgtacgtcttccccaccgagaatggcttgcgttgcaacacccaggagctc
aattggggaggctggcgcgtcgacggattattccatttctccatcatgccttacggcagc
aaacagttgatggacgtcgaccattggcatctgttgcgcgccgaacccggtatctggatc
accctggacgcgcagcacatgggcgtggggggcgatgactcctggacgccgagcgtgcat
gaagagtggttgttaaaggaaacgcagtggcgttatcaggtcagtgttaagcatcagtaa
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