KEGG   Serratia rubidaea: AXX16_2353
Entry
AXX16_2353        CDS       T04417                                 
Name
(GenBank) Transcriptional repressor of PutA and PutP
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
srz  Serratia rubidaea
Pathway
srz00250  Alanine, aspartate and glutamate metabolism
srz00330  Arginine and proline metabolism
srz01100  Metabolic pathways
srz01110  Biosynthesis of secondary metabolites
Module
srz_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:srz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    AXX16_2353
   00330 Arginine and proline metabolism
    AXX16_2353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:srz03000]
    AXX16_2353
Enzymes [BR:srz01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     AXX16_2353
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     AXX16_2353
Transcription factors [BR:srz03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    AXX16_2353
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AML58054
LinkDB
Position
complement(2539760..2543731)
AA seq 1323 aa
MGTTTMGVKLDEATRDRIKTAAQRIDRTPHWLIKQAIFNYLERLESGSDIPEIPAVNAAG
SAEADDIMPQPQEESHQPFLEFAEHILPQSVTRAAITAAYRRPEQEAVPMLLEQARLPAD
LAQATHKMAYGIAEKLRNQKSAHGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKP
TRDALIRDKISTGNWHSHLGRSPSLFVNAATWGLLFTGKLVSTHNEANLSRSLNRIIGKS
GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTEEDAQA
YMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPLLLSLTLL
ARQYDIGINIDAEEADRLEISLDLLEKLCFEPQLAGWNGIGFVIQAYQKRCPAAIDAVID
IAQRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACARKLLSVPNL
IYPQFATHNAHTLSAIYHMAGNNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRI
YAPVGTHETLLAYLVRRLLENGANTSFVNRIADTTLSLDELVADPVLAVEALAASEGQIG
LPHPKIPLPRDLYGEKRVNSSGLDLSNEQRLASLSSALLTSAAQEWRADPIIDAESDQGV
EQPVINPAEPSDVVGYVREATESEVSRALDAAAAAGPIWFATPPAERAAVLERAAELMDG
QLQSLIGILVREAGKTFNNAIAEVREAVDFLHYYAGQVRDDFANDSHRPLGPVVCISPWN
FPLAIFTGQIAAALAAGNSVLAKPAEQTPLVAAQAVRILLEAGIPQGVLQLLPGLGETVG
AQLVNDERVRGVMFTGSTAVAGILQRSIAGRLDPQGRPTPLIAETGGLNAMIVDSSALTE
QVVTDVVASAFDSAGQRCSALRVLCIQEDVAEHTLQMLRGAMAECRMGNPERLSTDIGPV
IDAEAKTGIDRHIQTMRAKGRKVYQAAQRNAQDEKEWPRGTFVKPTLIELESFDELQKEI
FGPVLHVVRYRRANLEALVDQINAAGYGLTLGIHTRIDETIARVTERAKVGNLYVNRNMV
GAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPEDAVQRTLDRQDAERPMEASARPAL
LAPHQALEKWAVAENLRDLAQLAQRYAELGQGGTVRPLPGPTGERNTYALLPRERVLCLA
DNDADALTQLAAVLAVGSQALWPEAELQRTLYRRLPNEVQARIAFTKDWQSDKVEFDAAM
HHGDADQLRILCEQIAQRSGAIVSVQGFTHGETNILLERLLVERSLSVNTAAAGGNASLM
TIG
NT seq 3972 nt   +upstreamnt  +downstreamnt
atgggcacgaccactatgggcgtcaagcttgatgaagcaacgcgcgatcgcattaaaacc
gctgcacaacgcatcgatcgcacgccgcactggttaatcaaacaagccatttttaattat
ctcgaacgccttgagagcggttccgatatccctgaaattcctgcagttaatgccgccggc
agcgccgaagcggacgacattatgccgcaaccgcaggaagagtcccaccagccgttcctg
gaatttgccgaacacattctgccgcagtcggtaacgcgcgccgccattaccgccgcctac
cgccgtcctgagcaggaagcggtgccgatgttgctcgaacaggcgcgcttaccggccgat
cttgcacaggctacgcacaagatggcctacggcatcgccgagaagctgcggaaccaaaag
agtgcacacggacgcgccggcatggtgcaaggcctgctgcaggagttctcactctcctca
caggaaggcgtggcgctgatgtgtctggcggaggcgctgctgcgcattccggacaaacca
acccgcgacgcgctgatccgcgacaaaatcagcaccggcaactggcactcccacctggga
cgcagcccgtcgctgttcgtgaacgccgccacctggggcctgctgtttaccggcaaactg
gtgtccacccataacgaggccaacctgtcgcgctcgctgaaccgcattatcggcaagagc
ggcgagccgctgatccgtaaaggcgtcgatatggcgatgcgcctgatgggcgagcagttc
gtcaccggcgaaaccatcgccgaggcgctggccaacgcgcgcaagctggaagacaaaggc
ttccgctactcgtacgacatgctgggcgaggccgcgctgaccgaggaggacgcgcaggcc
tatatggtttcctaccagcaggccatccacgccatcggcaaggcctccaacggccgcggc
atttatgaaggcccggggatctccatcaagctgtccgccctgcacccgcgctacagccgc
gcgcagtacgaccgggtgatggaggagctgtatccgctgctgctgtcgctgaccctgctg
gcgcgtcagtatgatatcggcatcaatatcgacgccgaagaggccgaccgcctggagatc
tcgctcgacctgctggaaaaactctgcttcgaaccgcagctggccggctggaacggcatc
ggcttcgtgattcaggcctatcagaagcgctgcccggccgccattgacgcggtgatcgac
atcgcgcagcgcagccgtcgccgcctgatgatccgtctggtgaagggcgcctactgggac
agcgaaatcaaacgcgcccagatggacggcctggagggctacccggtctatacccgcaag
gtctacaccgacgtctcttacctggcctgcgcgcgcaagctgctgtcggtgccgaatctg
atttacccgcagttcgccacccataacgcccacacgctgagcgcgatttatcatatggcg
ggcaacaactactatccggggcagtatgagttccagtgcctgcacgggatgggcgagccg
ctgtacgagcaggtggtgggtaaaatcgccgacggcaagctgaaccgcccgtgccgcatc
tacgcgccggtcggcacccacgaaacgctgctggcctatctggtgcgtcgcctgctggaa
aacggcgccaacacctcgttcgtcaaccgcattgccgacaccacgctgtctctcgacgaa
ctggtggccgatccggtgctggcggtcgaggcgctggccgccagcgaaggccagattggc
ctgccgcatcctaaaattccgttgccgcgcgatctgtacggcgaaaaacgcgttaactcc
agcggcctggatctgtcgaacgagcagcgcctggcctcgctgtccagcgccctgctcacc
agcgccgcgcaagagtggcgcgccgatccgattatcgacgccgagagcgatcagggcgtg
gagcagccggtgattaacccggccgagccgagcgatgtggtcggctacgtccgtgaagcc
accgaaagcgaggtcagccgcgcgctggacgccgccgcggcggccggcccgatctggttc
gccaccccgccggcagagcgcgccgcggtgctggagcgcgccgccgagctgatggacggc
cagctgcagagcctgatcggcatcctggtgcgcgaagcgggcaaaacctttaacaacgcc
atcgccgaagtgcgtgaagcggtcgacttcctgcattactacgccggccaggtgcgcgat
gacttcgccaacgacagccaccgtccgctggggccggtagtgtgcatcagcccgtggaac
ttcccgctggcgatcttcaccgggcagatcgccgcggcgctggccgccggcaacagcgtg
ctggccaaaccggcggaacagacgccgctggtggcggcgcaggcggtgcgcattctgctg
gaggccggcattccgcagggcgtactgcagctgctgccgggcctcggggaaaccgtcggc
gcgcagctggttaatgacgagcgcgtgcgcggcgtgatgttcaccggctccaccgccgtg
gccggcattctgcagcgcagcatcgccggacgtctggatccgcaggggcgcccgacgccg
ctgatcgccgaaaccggcggcctgaacgcgatgatcgtcgactcctccgccctgaccgaa
caggtggtcaccgacgtggtggcctccgcgttcgacagcgccggtcagcgctgttccgcg
ctgcgcgtgctgtgcattcaggaagacgtggcggaacacacgctgcaaatgctgcgcggc
gccatggcggaatgccgcatgggcaacccggaacgcctgtccaccgacatcggcccggtg
atcgacgccgaagccaaaaccggcatcgaccgccatattcagaccatgcgcgccaaaggc
cgcaaggtgtatcaggcggcgcagcgtaacgcgcaggatgagaaagagtggccgcgcggc
accttcgtcaagccgacgctgattgagctggagagcttcgacgaactgcagaaagagatc
ttcggcccggtgctgcacgtggtgcgctaccgtcgcgccaacctggaagcgctggtcgat
cagattaacgccgccggctacggcctgacgctgggcatccacacccgtattgatgaaacc
atcgcgcgggtgaccgaacgcgccaaggtgggcaacctgtacgtcaaccgcaatatggtc
ggcgcggtggtcggcgtccagccgttcggcggcgaaggcctgtccggcaccggcccgaaa
gccggcggcccgctgtacctctaccgcctgctggccaaccgcccggaagacgcggtgcag
cgcacgctggatcgtcaggacgccgagcgtccgatggaggccagtgcgcgcccggccctg
ttggcgccgcatcaggcgctggagaaatgggcggtggcggaaaacctgcgcgatctggcg
cagctggcgcagcgctatgccgagctcggccagggcggcaccgtacgtccgctgcctggc
ccgaccggcgagcgcaacacctacgccctgctgccgcgcgagcgcgtactgtgcctggcg
gataacgacgccgacgcgctgacgcagctggccgccgtgctggcggtcggcagccaggcg
ctgtggccggaagccgagctgcagcgcacgctgtaccgtcgcctgccgaatgaggtgcag
gcgcgcatcgccttcaccaaagactggcagagcgataaggtggagttcgacgccgccatg
catcacggcgacgccgatcagctgcgtatcctgtgcgagcagatcgctcagcgcagcggc
gccatcgtctccgtgcagggcttcacccacggcgaaaccaatatcctgctggaacgcctg
ctggttgaacgctcgctgagcgtcaacaccgccgccgccggcggtaacgccagcctgatg
accatcggctga

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