Serratia rubidaea: AXX16_3909
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Entry
AXX16_3909 CDS
T04417
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
srz
Serratia rubidaea
Pathway
srz00020
Citrate cycle (TCA cycle)
srz00785
Lipoic acid metabolism
srz01100
Metabolic pathways
srz01110
Biosynthesis of secondary metabolites
srz01120
Microbial metabolism in diverse environments
srz01200
Carbon metabolism
srz01210
2-Oxocarboxylic acid metabolism
Module
srz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AXX16_3909
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AXX16_3909
Enzymes [BR:
srz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AXX16_3909
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
HEPN_MAE_28990
BTRD1
Motif
Other DBs
NCBI-ProteinID:
AML59598
UniProt:
A0A140EZZ0
LinkDB
All DBs
Position
complement(4211840..4214647)
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AA seq
935 aa
AA seq
DB search
MQNGAMKAWLDSSYLAGANQSYIEQLYEDYLTDPGSVEDSWRSIFQQLPTAGVKPDQLHS
QTREYFRRLAKDSARYNGSINDPDTDAKQVKVLQLINAFRFRGHQHANLDPLGLWKQDAV
PDLDPAYHNLTEADFQETFNVGSFAIGKDTMKLADLYEALKQTYCGSIGAEYMHITNTEE
KRWIQQRIESVVGHASFSSDEKRRFLNELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LKEMVRHAGKNGTREVVLGMAHRGRLNVLINVLGKKPADLFDEFAGKHKEHLGTGDVKYH
QGFSSDVETEGGMVHLALAFNPSHLEIVSPVVMGSVRARRDRLDEARSNMVLPITIHGDA
AITGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPLDARSTQYCTDIAKMVQSP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPLMYQKIK
KHPTPRKIYADVLTEEKVATLEDATEMVNLYRDALDRGECVVEEWRPMNLHSFTWSPYLN
HEWDEEYPSKVETKRLQDLAKRISSAPESVEMQSRVAKIYADRAEMAAGNKPFDWGAAET
LAYATMVDEGIPIRLSGEDAGRGTFFHRHAVVHNQKDGTSYVPLANVHAGQGEFKVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPLAVSSLDELANGSFQPAIGEIDELDPKAVKRVVLCSGKVYYDLLEQRRKNDQK
DVAIVRIEQLYPFPHQAVQAVLEQYAHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQALVNDALNID
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggcgcgaaccag
tcttacatagagcagctctatgaagactacctaaccgatccgggctctgtcgaagatagc
tggcgttccattttccaacagctccccaccgcgggtgtcaaacccgatcaacttcactcc
caaactcgtgaatacttccgccgtctggcgaaggattctgcgcgttacaacggcagcatc
aacgatccggacaccgatgccaaacaggtgaaggtcctgcagctgatcaacgccttccgc
ttccgcggacatcagcatgccaaccttgacccgcttggcctgtggaagcaggacgcagta
cctgacctcgatcctgcttatcacaacctgaccgaagccgacttccaggaaaccttcaac
gtgggttctttcgccattggcaaagacaccatgaagctggcggacctgtatgaagcgctg
aagcagacctactgcggctctatcggcgcagaatacatgcatatcaccaataccgaagaa
aaacgctggattcagcagcgtatcgaatcggtggttggccatgccagcttcagcagcgat
gagaaacgtcgcttcctgaacgagctgaccgcagcagaaggcctggagcgttacctgggc
gccaagttcccgggggcgaagcgcttctcccttgaaggcggggacgcgctggtgccgatg
ctcaaagagatggtgcgtcacgccggcaagaacggcacgcgcgaagtcgtgctgggcatg
gcccaccgcggccgcctgaacgtgctgatcaacgtgctgggtaaaaagcctgccgacctg
ttcgacgagtttgccggcaaacataaagaacacctcggcaccggcgacgtgaaataccac
cagggcttctcgtccgacgtggaaaccgaaggcggcatggtccacctggcgctggcgttt
aacccgtcgcacctggagatcgtcagcccggtggttatgggctccgtacgcgcccgtcgc
gaccgtctggatgaagcgcgcagcaacatggtgctgccgatcaccatccacggcgacgcc
gccattaccggccagggcgtggtgcaggaaaccctgaacatgtctcaggcgcgcggctac
gaagtgggcggcacggtgcgcatcgtcatcaacaaccagattggtttcaccacctccaac
ccgctggatgcgcgctccacccaatactgtaccgatatcgccaagatggtgcagtcgccg
attttccacgttaatgctgacgatccggaagcggtggcgtttgttacccgtctggcgttg
gatttccgtaacacctttaaacgcgacgtcatgatcgatctggtttgctatcgtcgtcat
gggcacaacgaagccgatgagccaagcgcaacccagccgctgatgtatcagaagatcaag
aagcacccgacgccgcgtaaaatctacgccgatgtgctgaccgaagagaaagtcgcgacg
ctggaagatgccacggaaatggtcaatctgtatcgcgatgcgctggaccgcggcgagtgc
gtggtggaagagtggcgtccgatgaacctgcactccttcacctggtcaccgtacctgaac
cacgagtgggatgaagagtacccaagcaaggtggaaaccaagcgtctgcaggatctggcc
aagcgcatcagcagcgcgccggagtcggttgagatgcagtcacgcgtggcgaaaatctac
gccgaccgcgccgagatggcggcgggcaacaagccgtttgactggggcgcggcggaaacg
ctggcctacgcgacgatggttgacgaaggcattccaatccgtctgtccggcgaagatgcc
ggccgcggcaccttcttccaccgccacgcggtggtgcacaaccaaaaagacggtacttcc
tacgtgccgctggctaacgtgcacgccgggcagggcgagttcaaggtctgggactccgta
ctgtctgaagaggcggtgctggcgttcgaatacggctacgctacggcggaaccgcgcacc
ctgaccatctgggaagcgcagttcggcgacttcgccaacggcgctcaggtggtgattgac
cagttcatcagctccggcgagcagaaatggggccgtatgtgcggcctggtgatgctactg
ccgcacggctatgaaggccagggcccagagcactcctccgcgcgtctggagcgttatctg
cagctgtgcgcagaacagaatatgcaggtctgcatcccgtccacgccggctcaggtttac
cacatgctgcgtcgtcaggcgctgcgcggtatgcgccgtccgctggtggtgatgtcgccg
aagtctctgctgcgtcacccgctggcggtctcttcgctggacgaactggcgaacggcagc
ttccagccggcgatcggcgagatcgacgagctggatccgaaggcggtgaaacgcgtggtg
ctgtgctccggcaaggtgtactacgacctgctggaacagcgtcgcaaaaacgaccagaaa
gacgtcgccattgtacgtatcgagcagctgtatccgttcccgcaccaggcggtgcaggcg
gtgctggagcagtatgcgcacgtccatgacttcgtgtggtgtcaggaagaaccgctgaac
cagggcgcctggtactgcagccaacacaatttccgtgaagtgattccgttcggagcctct
ttacgttacgccggacgtccggcctctgcttctccggcagtgggttatatgtccgtacac
cagaagcagcagcaggctctggttaatgatgcgctgaatattgattaa
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