Serratia rubidaea: AXX16_4559
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Entry
AXX16_4559 CDS
T04417
Name
(GenBank) L,D-transpeptidase YbiS
KO
K19235
L,D-transpeptidase YbiS
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srz01002
]
AXX16_4559
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
AXX16_4559
Peptidases and inhibitors [BR:
srz01002
]
Cysteine peptidases
Family C82
AXX16_4559
Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AXX16_4559
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AML60226
UniProt:
A0A140F1K5
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All DBs
Position
complement(4897712..4898626)
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AA seq
304 aa
AA seq
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MSIRALLTLFTALVAFSQTALAVVYPLPAKDSRLVGENIQIQVPEDSKLPLESFAAQYQM
GLSNMLEANPGVDPFLPKAGSTLTIPQQLILPDAPRQGIIINSAEMRLYYYPKGSNTVVV
LPIGIGQLGKDTPMNWITSVQRKKDGPTWTPTAKMREEYAAEGEILPAVFPAGPDNPMGL
YALYIGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKYLFDNVPVGTRVQFINEPVKASV
EPDGSRYLEVHNPLSANEEQLKSKDPVPVMLSPAVGKVLMDSGVNQSEVDAAIKARSGMP
VKVN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcgcgcgttattaaccctgtttacggccctggtggcgttcagccagaccgcc
ctcgccgttgtttaccctctgccggccaaagacagccgcctggtgggggagaatatccag
atccaggtccctgaggacagcaagctgccgctggaaagctttgcggcgcagtaccagatg
ggcctgagcaatatgctggaagccaacccgggcgtcgatcccttcctgccgaaggccggc
agcacgctgaccattccacagcagctgattctgccggatgcgccgcgtcagggcattatt
atcaacagcgcagaaatgcgtctgtactactacccgaagggcagcaacaccgtggtggtg
ctgccgatcggtatcggtcagctgggcaaagacacgccgatgaactggatcaccagcgta
cagcgcaagaaggacggcccgacctggacgccgaccgccaaaatgcgtgaagagtatgcg
gcggaaggggaaatcctgccggcggtgttcccggccggcccggataacccgatggggctg
tatgcgctgtatatcggccgcctgtacgcgatccacggcaccaatgccaacttcggcatc
ggcctgcgcgtcagccacggctgcgtgcgcctgcgcgccgacgatatcaaatacctgttc
gataacgtgccggtcggcacgcgcgtacagtttatcaatgagccggtgaaagcctcggtc
gagccggacggcagccgctatctggaagtgcacaacccgctttccgccaacgaagagcag
ctgaagtcgaaagatccggtgccggtgatgctgtcgccggcggtgggcaaggtgctgatg
gacagcggcgtcaaccagagcgaagtcgacgcggcgatcaaggcgcgttccggcatgccg
gtgaaagtgaactga
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