Swingsia samuiensis: E3D00_04805
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Entry
E3D00_04805 CDS
T06080
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00540
Lipopolysaccharide biosynthesis
ssam01100
Metabolic pathways
ssam01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E3D00_04805 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssam01005
]
E3D00_04805 (rfaD)
Enzymes [BR:
ssam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E3D00_04805 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ssam01005
]
Core region
E3D00_04805 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QDH16961
UniProt:
A0A4Y6UKP3
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All DBs
Position
1042379..1043359
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AA seq
326 aa
AA seq
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MIIVTGGAGFIGSCLHAALRRRGLRTVIVDRLREGVKWRNLLSHAPDRIVSPEELPEFLE
DAPEIQAVFHMGAISSTTARDGDLVWHSNVTLSQFLWRWCARHHVPMIYASSAATYGAAD
KPEMFLDGVDNISHLKPLNLYGWSKQSFDVWVKRELQSGNAAPPQWAGLKFFNVYGPNEY
HKGSMISVVKVKYDDLQKGFAPKLFRSDVPSIPDGQQMRDFIWVGDVVDVMMWLFDHPKV
SGLFNCGTGVARSYLDLAYAVCDAAQRERAVEFVDMPEKLKGQYQSYTCANMQRLRDAGY
ENSFTSLEDGIHQYVREYLMKPEPNL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcaccggtggagccggatttattggatcgtgtcttcatgccgccttgcgt
cgccgcggtttgagaactgttattgtggatcgtttgcgggagggggtaaaatggcgcaat
cttttatctcacgcccctgatcggattgtatctccagaagaattgcctgagtttcttgag
gacgctccagagattcaggctgtattccatatgggtgcaatcagttcaacgacggcccga
gatggggaccttgtttggcattcgaatgtcacactttcccaatttctgtggcgttggtgt
gcacgacaccatgttccgatgatctatgcctcatcggcggctacctatggggcagcggat
aaacctgagatgtttttagacggtgtcgacaacatttctcatcttaaacctttaaattta
tatggctggtcaaagcaatcatttgatgtgtgggttaagcgtgaactgcagtcaggcaat
gcagcacctccccagtgggctggactgaagttttttaatgtttatggcccgaatgagtat
cataaaggctcaatgatatcggttgtgaaggttaagtatgatgaccttcaaaaaggcttt
gcaccaaagttattccgatccgatgtgccgagtattccagacggtcagcaaatgcgggac
tttatctgggtcggagatgtcgttgatgtgatgatgtggctctttgaccatcctaaagtc
agtgggctgtttaactgtgggacaggtgtcgcccggagctacttggatttggcatatgcc
gtgtgtgatgcggcacagcgtgaacgagctgttgagtttgttgatatgcctgagaagtta
aaggggcaatatcagtcatatacatgcgcaaatatgcaacggttgagagacgccgggtat
gaaaattcatttacctctctcgaagatggtattcatcaatatgtacgggaatatttaatg
aaaccggagcctaatctttga
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