Sus scrofa (pig): 100621027
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Entry
100621027 CDS
T01009
Symbol
CX3CL1
Name
(RefSeq) LOW QUALITY PROTEIN: fractalkine
KO
K05508
C-X3-C motif chemokine 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04060
Cytokine-cytokine receptor interaction
ssc04061
Viral protein interaction with cytokine and cytokine receptor
ssc04062
Chemokine signaling pathway
ssc04148
Efferocytosis
ssc04668
TNF signaling pathway
ssc05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100621027 (CX3CL1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100621027 (CX3CL1)
04061 Viral protein interaction with cytokine and cytokine receptor
100621027 (CX3CL1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100621027 (CX3CL1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
100621027 (CX3CL1)
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100621027 (CX3CL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssc04052
]
100621027 (CX3CL1)
Cytokines and neuropeptides [BR:
ssc04052
]
Cytokines
Chemokines
100621027 (CX3CL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
100621027
NCBI-ProteinID:
XP_020949567
Ensembl:
ENSSSCG00000024759
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Position
6:19312351..19324439
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AA seq
385 aa
AA seq
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MALTSFSWLLRSASFCHLAMLLAGQHFGVNKCSIKCSGMTNKMIPLQLLVHYQLPQGSCG
QNVVILKTRKQKLFCADSNEEWVREAMDYLNRRADLLGQNGGKFEKQIGMSEPRTTLATR
GMDGSAVSETKVTSESSSQEARRAFGTSPGLPTGAADSRGTRFPSTSKSPDGGPETTELS
NGAAITTATSWQSSSXPPGAGPWAEEKASEAPSTQAPSTQAPTISYTVPEDYVGSEPLWI
KGQDPTPENSLGPKEVGPPSAPMDAFMGPGNVSDVFVVSASSEGSPSTDPSASGRAPKAK
EPMHATMDPQRLGVLSTSIPDSHAATRRQAVGLLAFLGLLFFLGVAMFAYQSLQGCSRKM
SGDMAEGLCYVPRSCGSNSYVLVPV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctcttacatctttctcgtggctgctccgctcggcttcattctgccatcttgccatg
ctgctggcgggacagcactttggtgtgaacaaatgcagcatcaagtgcagcggtatgacc
aacaagatgatccctctgcagctcctagtccattaccaactgcctcaaggatcatgcggc
caaaatgtcgtcatcttgaagaccagaaagcagaaattattctgtgctgactcaaacgag
gaatgggtcagagaggccatggactatctaaaccgccgggctgatcttctgggtcagaat
ggtggcaagttcgagaagcaaatcggcatgagtgagcccaggaccaccctggccaccagg
ggaatggacgggtctgcggtctcagagaccaaagtcacaagtgaaagcagtagccaggag
gcacggagggccttcggtacttccccagggctgccgacaggagcggctgattccaggggg
accaggttcccctccacttcaaagtctccggatggagggcccgagacaactgagctttcc
aacggggctgccatcaccaccgccacgtcttggcagagttcttctntaccaccgggggca
ggcccctgggctgaggagaaagcctctgaagccccctccacccaggccccctccacccag
gcccctactatttcatacacagtcccagaggactatgttgggtctgaacctttgtggatc
aagggccaggatcccacaccagagaactctctagggcccaaagaggtgggtcccccttca
gctcccatggatgctttcatgggacccggcaacgtttctgacgtcttcgtggtctctgca
tcctctgaagggtctcccagcacggatccatcggcctccggcagggcccccaaggccaag
gagcccatgcacgccaccatggacccccagaggctgggcgtcctcagtacttccatcccc
gactcccatgcggccacccggaggcaggcggtggggctgctggccttccttggtctcctt
ttcttcctcggagtggccatgtttgcctaccagagtctgcagggctgctcccgcaagatg
tcaggggacatggcagaagggctatgctatgtcccccggagctgtggcagtaactcttac
gtcctggtgccagtgtga
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