KEGG   Sus scrofa (pig): 100621027
Entry
100621027         CDS       T01009                                 
Symbol
CX3CL1
Name
(RefSeq) LOW QUALITY PROTEIN: fractalkine
  KO
K05508  C-X3-C motif chemokine 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04061  Viral protein interaction with cytokine and cytokine receptor
ssc04062  Chemokine signaling pathway
ssc04148  Efferocytosis
ssc04668  TNF signaling pathway
ssc05163  Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    100621027 (CX3CL1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100621027 (CX3CL1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100621027 (CX3CL1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100621027 (CX3CL1)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    100621027 (CX3CL1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    100621027 (CX3CL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    100621027 (CX3CL1)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Chemokines
   100621027 (CX3CL1)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 100621027
NCBI-ProteinID: XP_020949567
Ensembl: ENSSSCG00000024759
LinkDB
Position
6:19312351..19324439
AA seq 385 aa
MALTSFSWLLRSASFCHLAMLLAGQHFGVNKCSIKCSGMTNKMIPLQLLVHYQLPQGSCG
QNVVILKTRKQKLFCADSNEEWVREAMDYLNRRADLLGQNGGKFEKQIGMSEPRTTLATR
GMDGSAVSETKVTSESSSQEARRAFGTSPGLPTGAADSRGTRFPSTSKSPDGGPETTELS
NGAAITTATSWQSSSXPPGAGPWAEEKASEAPSTQAPSTQAPTISYTVPEDYVGSEPLWI
KGQDPTPENSLGPKEVGPPSAPMDAFMGPGNVSDVFVVSASSEGSPSTDPSASGRAPKAK
EPMHATMDPQRLGVLSTSIPDSHAATRRQAVGLLAFLGLLFFLGVAMFAYQSLQGCSRKM
SGDMAEGLCYVPRSCGSNSYVLVPV
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggctcttacatctttctcgtggctgctccgctcggcttcattctgccatcttgccatg
ctgctggcgggacagcactttggtgtgaacaaatgcagcatcaagtgcagcggtatgacc
aacaagatgatccctctgcagctcctagtccattaccaactgcctcaaggatcatgcggc
caaaatgtcgtcatcttgaagaccagaaagcagaaattattctgtgctgactcaaacgag
gaatgggtcagagaggccatggactatctaaaccgccgggctgatcttctgggtcagaat
ggtggcaagttcgagaagcaaatcggcatgagtgagcccaggaccaccctggccaccagg
ggaatggacgggtctgcggtctcagagaccaaagtcacaagtgaaagcagtagccaggag
gcacggagggccttcggtacttccccagggctgccgacaggagcggctgattccaggggg
accaggttcccctccacttcaaagtctccggatggagggcccgagacaactgagctttcc
aacggggctgccatcaccaccgccacgtcttggcagagttcttctntaccaccgggggca
ggcccctgggctgaggagaaagcctctgaagccccctccacccaggccccctccacccag
gcccctactatttcatacacagtcccagaggactatgttgggtctgaacctttgtggatc
aagggccaggatcccacaccagagaactctctagggcccaaagaggtgggtcccccttca
gctcccatggatgctttcatgggacccggcaacgtttctgacgtcttcgtggtctctgca
tcctctgaagggtctcccagcacggatccatcggcctccggcagggcccccaaggccaag
gagcccatgcacgccaccatggacccccagaggctgggcgtcctcagtacttccatcccc
gactcccatgcggccacccggaggcaggcggtggggctgctggccttccttggtctcctt
ttcttcctcggagtggccatgtttgcctaccagagtctgcagggctgctcccgcaagatg
tcaggggacatggcagaagggctatgctatgtcccccggagctgtggcagtaactcttac
gtcctggtgccagtgtga

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