Sus scrofa (pig): 100623478
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Entry
100623478 CDS
T01009
Symbol
AFG3L2
Name
(RefSeq) LOW QUALITY PROTEIN: AFG3-like protein 2
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100623478 (AFG3L2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100623478 (AFG3L2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssc03110
]
100623478 (AFG3L2)
Peptidases and inhibitors [BR:
ssc01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
100623478 (AFG3L2)
Chaperones and folding catalysts [BR:
ssc03110
]
Other chaperones and cochaperones
AAA proteases
100623478 (AFG3L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_16
AAA_5
RuvB_N
TIP49
nSTAND3
AAA_14
Mg_chelatase
AAA_17
gpW
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
100623478
NCBI-ProteinID:
XP_020951683
Ensembl:
ENSSSCG00000022947
LinkDB
All DBs
Position
6:97200890..97234577
Genome browser
AA seq
806 aa
AA seq
DB search
MAHRCLLLWGRGACRPRGLPPPLVPGGRAGPTERLCLQTLYRYATTQAKTSRNSLLTDVI
AAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKEPKPAAAPRASGGGVGGGGKRG
GKKDDSHWWSRFQKGDVPWDDKEFRMYFLWTALFWGGVMLYFLFRSSGREITWKDFVNNY
LSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGEN
RVPVVYIAESDGSFLLSMLPTALIIAFLLYTIRRGPAGIGRSGRGMGGLFSVGETTAKVL
KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAK
ATXGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG
NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD
IKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS
INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR
GKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVAEEIFFGRITXGAQDDLRKVTQSAYA
QIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEK
KADVEKVALLLLEKEVLDKNNMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDW
NREREGSGEEPAGEKVASQVQGASPS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgctgcctgctgctgtggggccgcggtgcttgccggccccgcgggctgccc
ccgccgctcgtgcctggcggccgcgcgggacccaccgaacggctctgcctgcagacgctt
tatcgatatgctacaactcaagcaaaaaccagcagaaattctcttctgacagatgtaatc
gctgcttaccaaagattctgttctcggcctccaaaaggatttgaaaaatacttcccaaat
ggaaaaaatggaaaaaaagctagtgaacctaaagaagttatgggagagaaaaaagaacca
aagccggcggctgccccacgtgcgtctggaggaggtgttggtggcggtggaaaacgaggt
ggcaagaaggatgattctcactggtggtccaggttccagaagggtgatgttccgtgggat
gacaaggaattcaggatgtactttctgtggacggctctgttttggggcggagtcatgctt
tacttcctgttcaggagctctggcagagaaatcacatggaaggactttgtcaataactat
ctctccaaaggagtggtagacagactggaagtcgtcaacaagcgttttgttcgagtgact
tttacgccaggaaaaactcctgttgatggacagtacgtctggttcaatattggcagtgtg
gacaccttcgagcggaatctggaaactttacagcaggagctgggcatcgaaggggagaat
cgggtccccgtggtctacatcgctgagagtgacggctccttcctgctcagcatgctgccc
accgcgctcatcatcgccttcctgctctacaccatccggagggggccggccggcatcggc
cgctctggccggggcatgggtggactcttcagtgtgggagagactactgccaaggtctta
aaggacgagatagatgtcaagttcaaagatgtggccggctgcgaggaggccaagctagag
atcatggagtttgtgaacttcctgaaaaacccaaagcagtatcaagacctgggagcaaaa
atccccaagggtgccatcctcactggtcctccaggcactgggaaaacactgctggccaag
gccacgnctggagaagccaatgtccctttcatcaccgtcagtggctctgagttcttggag
atgtttgtgggcgtgggccctgctcgagtccgagacttatttgcccttgctcggaagaat
gccccctgcatcctcttcattgacgaaatagacgctgtgggaaggaagagaggaaggggc
aattttggggggcagagcgaacaggagaacacactcaatcaattgcttgtggaaatggac
ggctttaacacaacgacgaacgtggtcattttggcgggcaccaatcggccggatatcctg
gaccctgcgctcttgaggcccggacgcttcgacagacagatcttcattggaccaccggac
ataaaaggaagagcctctatcttcaaagtgcacctccgaccgctgaaactggacagtacc
ctggaaaaagagaagctggcaagaaagcttgcgtccttgacgccagggttctcaggggct
gatgttgccaatgtttgcaatgaagctgctctgattgccgccagacacctttcagattcc
atcaatcagaaacactttgaacaagcgattgagcgagtgattggaggcctagagaagaaa
actcaggtcctgcagcccgaggagaagaagacagtggcgtaccacgaggcaggccacgca
gttgctggctggtatctggagcacgcagacccgctcctgaaggtctccatcatcccacgg
ggcaagggcctgggctacgcccagtacctccccaaggagcagtatctatacactaaagag
cagctgctggacaggatgtgcatgaccctgggtggccgtgtggccgaggaaatcttcttt
gggagaattacanacggtgcccaggatgacttgcggaaagtgactcagagcgcatatgcc
cagattgttcagtttggcatgaacgaaaaggtcgggcaaatctcctttgacctcccacgc
cagggggacatggtgttagagaagccttacagcgaagccaccgccagattgattgatgac
gaggtgcggatacttatcaacgatgcttataaaaggacagttgctctgctcacagagaag
aaagctgacgtggaaaaggttgctctgctgttattagaaaaagaagtattagacaagaat
aacatggttgaacttttgggccccagaccatttgcagaaaaatctacatacgaagagttt
gtggaaggcacgggcagcctggatgaggacacatcactcccagagggcctgaaggactgg
aacagggagcgggagggcagcggggaggaacccgcgggcgagaaggtcgccagccaggtc
cagggggccagcccctcgtag
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