Sus scrofa (pig): 100623647
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Entry
100623647 CDS
T01009
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04024
cAMP signaling pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04713
Circadian entrainment
ssc04720
Long-term potentiation
ssc04723
Retrograde endocannabinoid signaling
ssc04724
Glutamatergic synapse
ssc04728
Dopaminergic synapse
ssc04730
Long-term depression
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05031
Amphetamine addiction
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100623647 (GRIA1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100623647 (GRIA1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100623647 (GRIA1)
04728 Dopaminergic synapse
100623647 (GRIA1)
04720 Long-term potentiation
100623647 (GRIA1)
04730 Long-term depression
100623647 (GRIA1)
04723 Retrograde endocannabinoid signaling
100623647 (GRIA1)
09159 Environmental adaptation
04713 Circadian entrainment
100623647 (GRIA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100623647 (GRIA1)
05016 Huntington disease
100623647 (GRIA1)
05017 Spinocerebellar ataxia
100623647 (GRIA1)
05022 Pathways of neurodegeneration - multiple diseases
100623647 (GRIA1)
09165 Substance dependence
05031 Amphetamine addiction
100623647 (GRIA1)
05033 Nicotine addiction
100623647 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100623647 (GRIA1)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100623647 (GRIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
Motif
Other DBs
NCBI-GeneID:
100623647
NCBI-ProteinID:
XP_020932667
Ensembl:
ENSSSCG00000022569
LinkDB
All DBs
Position
16:complement(69332786..69654366)
Genome browser
AA seq
906 aa
AA seq
DB search
MQHIFAFFCTGFLGAVVGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDL
NKFKESGANVTGFQLVNYTDTIPAKIMQQWKTSDARDHTRVDWKRPKYTSALTYDGVKVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYV
MLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRNSGAGASGGGSGENGRVVSHDFPKSMQSIPCMSHSTGMP
LGATGL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccggtttcctaggcgcggtagtaggtgccaat
ttccccaacaatatccagatcgggggattatttccaaaccagcagtcacaggaacatgcg
gcttttagatttgctttgtcccaactcacggagcccccaaagctgctcccccagattgat
attgtgaacatcagtgacagctttgagatgacctacagattctgttcccagttctccaaa
ggagtctatgccatctttgggttttatgaacgaaggactgtcaacatgctgacctccttt
tgcggggccctccacgtctgcttcattacaccaagctttcccgttgacacatccaaccag
tttgtccttcagctgcgccccgagctgcaagatgccctcatcagtatcatcgaccattac
aagtggcaaaaatttgtctacatttatgatgctgaccggggtctgtccgtcctgcagaaa
gtcctggacacagccgcagagaagaactggcaggtgacagctgtcaatattttgacaacc
acggaggagggatatcggatgctcttccaagacctggagaagaaaaaggagcggctggtg
gtggtggactgtgaatcggaacgcctcaatgctatcctgggccagattataaagctggag
aagaatggcatcggctaccactatatccttgcaaatctgggtttcatggacattgaccta
aacaaattcaaggagagtggagcaaatgtgacaggtttccagttggtgaactacacagac
accatcccagccaagatcatgcagcagtggaaaaccagtgatgcccgggaccacacccgg
gtggactggaagagacctaagtacacctctgcgctcacctacgatggggtgaaggtgatg
gcggaggctttccagagcctgcggaggcagagaatcgatatctcccgccgggggaatgcc
ggggactgcctagctaaccccgccgtgccctggggccagggcatcgacatccagagagcg
ctgcagcaggtgcgttttgaaggcttgacaggaaatgtgcaatttaatgagaaaggacgc
cggaccaactacaccctccatgtgatcgaaatgaagcatgacggcatccgaaagatcggt
tactggaatgaagatgataagtttgtccctgcagccacagatgctcaagctgggggggat
aattcaagcgtccagaatagaacgtacattgtcactaccatcctagaagatccttacgtg
atgctcaagaagaatgccaaccagtttgaaggcaatgaccgttatgagggctactgtgtg
gagctggcagcagagattgccaagcacgtgggctactcctatcgtcttgagattgtcagc
gatggaaaatatggagcccgtgaccctgacacaaaggcttggaatggcatggtgggagag
ctggtctatggacgagcagatgtggccgtggcccctttaacaatcactttggtccgggaa
gaggtgatagacttctccaagccatttatgagtctgggaatctccatcatgataaaaaag
ccccagaagtccaagcccggggtgttctccttcctggatcctttggcttatgagatttgg
atgtgcatcgtcttcgcctacattggcgtgagcgtcgtcctcttcctggtcagccgcttc
agcccctacgagtggcacagtgaagagtttgaggaagggcgggaccagaccaccagcgac
cagtccaatgagtttggaatattcaacagcttgtggttctccctgggagccttcatgcag
cagggatgtgacatttctcccaggtccctgtccggccgcatcgttggtggcgtctggtgg
ttcttcaccctgatcatcatctcctcctacacggccaacctggccgccttcctgaccgtg
gagaggatggtgtctcccattgagagtgccgaggacctggccaagcagacagaaatcgcg
tatgggacactggaagcaggatccacaaaggagtttttcaggaggtccaaaatcgccgtg
tttgagaagatgtggacatacatgaagtcagcagaaccatccgtttttgtgcgaaccacg
gaggaggggatgatccgtgtacggaaatccaagggcaaatacgcctaccttctagaatcc
accatgaacgagtacattgagcagcggaaaccctgtgacaccatgaaggtgggaggtaac
ttggattccaaaggctatggcattgcgacgcccaaggggtccgctctgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgct
ctgagcctcagcaatgtggctggcgtgttctacatcctgattggaggacttggactagcc
atgctggttgccttaatcgagttctgctacaagtcacgtagcgaatccaagcggatgaag
ggtttctgtttgatcccacagcaatccatcaacgaagccatacggacatcaacgctcccc
cgaaacagcggggcaggagccagcggtggtggtagtggagaaaacggccgggtcgtcagc
catgacttccccaagtccatgcaatccattccctgcatgagccacagtacagggatgccc
ttgggagccactggattgtaa
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