Sus scrofa (pig): 100624019
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Entry
100624019 CDS
T01009
Symbol
OBSL1
Name
(RefSeq) obscurin-like protein 1 isoform X4
KO
K19574
obscurin-like protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100624019 (OBSL1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
100624019 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
C2-set_2
BiPBP_C
Ig_4
fn3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
100624019
NCBI-ProteinID:
XP_005672301
Ensembl:
ENSSSCG00000028052
LinkDB
All DBs
Position
15:complement(121560009..121581314)
Genome browser
AA seq
1896 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVLSGAEAELKCVVLGEPPPTVVWEKGGQPLAASERLSF
PADGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEPEPQPAERPLPP
PGAGEGAPVFLTGPRSQWVLRGAEVVLECQVGGLPEPTLYWEKDGMALDEVWDSSHFALE
PGRTEGRPGASLALRILAVRLPDSGVYVCHARNAHGHARAGALLQVHQPPESPPEDPDEV
PKPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHWEGRPLLPDRRRLMYRDRGG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRFRFTRPLQDVEGREHGIAVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGAVRRLIIHRLKADDEGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVFEGENAVLLVETGEAGVEGCWTRDGEDLPAICQSSSGHMH
ALVLPGVTREDAGEVTFSLGNSHTTTLLRVKCVKHNPPGPPLLVEMFKGHKNTVLLTWKP
PEPAPETPFIYRLERQEVGSEDWIQCFSIVKAGAVEVPGDCVPSEGDYRFRICTVSEHGR
SPHVVFHGSAHLVPTARLVAGLEDVQVYDGEDAVFSLHLSTIIQGTWFLNGEELKSHVPE
GEVEPGALRYRVEKKGLQHRLILQAVKHQDSGALVGFSCPGVQDSAALTIQESPVHILSP
QDKVSLTFTTSERVVLTCELSRVDFPASWYKDGQRVEESESLVVKLDGRKHRLILPEAQI
QDSGEFECRTEGVSAFFSVTVRDPPVHILDPREHVFVHAITSECVMLTCEVDREGAPVHW
YKDGQEVEESDFVVLENEGAHHRLVLPAAQPPDGGEFQCVAGDERAYFTVTITDVSSWIV
YPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAV
QLEDSGEYLCEIDDESASFTVTVTEPPVRIIYPRDEVTLVAVSLECVVLMCELSREDAPV
RWYKDGLEVEESEALVLESDGPRRRLVLPAAQPEDGGEFVCDAGDDSAFFTVTVTAPPER
IVHPAARALDLQFGAPGRVELRCEVAPAGSQVRWYKDGLEVEASDVLQLGAEGPIRTLTL
PHAEPEDAGEYVCETHDEAVTFNVSLAEPPVQFLAPEAAPSPLCVAPGDPVVLSCELSRA
GALVFWSHNGRPVQEGEGLELHAEGPRRILCIRAADPAHAGLYTCQSGAAPGAPSLSFTV
QVAEPPVRVVAPEAAQTRVRSTPGGDLELAVHLSGPGGPVRWYKDGERLASQGRVQLEQD
GARQVLRVRGARSRDAGEYLCDTPQDSRIFLVSVEEPPPVKLVSELTPLTVHEGDDATFR
CEVSPPDADVTWLRNGAVVTPGPQLEMAQNGSSRTLTLRGCQLEDAGTVTARAGGTATSA
RLHVRETELLFLRRLQDVRAEEGQDVCLQVETGRVGAAGAVRWVRGGVPLPPDSRLATTQ
DGHVHRLLIHGVVPADQGTYGCESHHDRTLARLSVRPRQLRVLRPLEDVTITEGGSATFQ
LELSQEGVTGEWARGGVRLQQGPTCQIHTEGHTHHLVLSGLGLADSGCISFTADALRCAA
RLTVREAPVTIVQGPQDLEVTEGDTATFECQLSQALADITWEKDGRPLTPSPRLRLQALG
TRRLLQLRRCGPMDAGTYSCTVGMARAGPVHLVVRERKVSVLSELRSVHAREGDGATFEC
TLSEVETTGNWELGGRPLRPGGRIRIRQEGKKHFLVLSELCAEDAGEVRFQAGPAQSVAQ
LEVEALPLQMCRRPPREKSVLVGRRAVLEVTVSRSGGQVCWLREGVELCPGDKYELRSHG
ATHSLVIHDVRPEDQGTYCCQAGADSAYTQLLVEGS
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggctcgggggatcaggggagccccccgtgcttcctgcgcttcccgcggccc
gtgcgggtgctaagcggcgcggaggccgagctcaagtgcgtggtgctgggggagccgccg
cccactgtcgtgtgggagaagggcgggcagcccctggcggcctcggagcgcctgagcttc
ccggcggacggcgccgagcacggcctgctgctgagcggcgcgctgcccaccgacgcgggg
gtttacgtgtgccgcgcccgcaacgcggctggagaggcctatgcagcggctgccgtcacc
gtgctggagccgccggctcccgagcccgagccccagcccgccgagcgcccgctgccgccg
cccggggccggagagggcgccccggtgttcctgacggggccccggtcccagtgggtgctg
cggggggcggaggtggtgctggaatgccaggtggggggcctccccgagcccacgctgtac
tgggagaaagacgggatggcgttggacgaagtgtgggacagcagccacttcgcgctcgag
ccgggccgcaccgagggccgcccaggagcgagcctggcgctgcgcatcctggcggtgcgg
ctgccggactcgggcgtctacgtgtgccacgcccgcaacgcgcacggccacgcgcgggcc
ggcgcgctgctgcaggtgcaccagccccccgagagcccgcccgaggaccccgacgaggtc
cccaagcccgtggtggagccactcaagtgtgcgcccaagaccttctgggtaaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcctgagcccgagatcgaatggcac
tgggagggccgcccgctgctccccgaccgccgtcgcctcatgtaccgcgaccgcggtggc
ggcttcgtgctcaaggtgctctactgccaggccaaggaccgcggcctctacgtgtgcgcc
gctcgcaactcggcgggccagacgctcagtgctgtgcagctgcacgtcaaagagccccgc
ttccgcttcaccaggcccctgcaggacgtggagggccgggagcatgggattgcagtgctg
gagtgtaaagtccccaactcccgcattcccacggcctggttccgcgaggaccagcggctg
ctgccctgccgcaagtacgagcagatcgaggagggcgccgtccggcgcctcatcatccac
aggctgaaagcggatgacgagggcgtctacctgtgcgagatgcgtggccgggtgcgcacc
gtggccaacgtgacggtcaaagggcccatcctgaagcgcctgccccggaagctcgacgtc
ttcgaaggagagaacgcggtgctgctggtggagacgggcgaggctggggtggaagggtgc
tggacccgagatggggaggacctgcctgccatctgccagagcagctccggccacatgcat
gccctggtcctgccaggggtcacccgagaggatgctggcgaggtcaccttcagcctgggc
aactcccacaccaccactctgctcagagtcaaatgcgtcaagcacaaccctcctggcccc
ccgctgttggtggagatgtttaagggccacaagaacacggtcctactgacctggaagcct
cccgaaccagctcctgagacccccttcatctaccggctggagcggcaggaagtgggctca
gaagactggatccagtgcttcagcattgtgaaagctggcgctgtggaggtgcccggagac
tgtgtgccctccgagggcgactaccgcttccgcatctgcaccgtcagcgaacacggccgc
agtccccacgttgtgttccacgggtctgctcacctcgtgcccacagctcgcctggtggct
ggtctagaggacgtgcaggtatatgacggggaagatgccgtcttctcccttcatctctcc
accatcatccagggcacctggttccttaatggggaagagctcaagagtcatgtgccagag
ggcgaggtggagcctggggccctgcggtaccgtgtggagaagaagggcctgcagcacaga
ctcatcctgcaagctgtcaagcaccaggacagcggggccctggtcggcttcagctgccca
ggcgtgcaggactcagccgccctcaccatccaagagagcccggtgcacatcctgagcccc
caggacaaggtgtcgttgaccttcacgacctcggagagggtggtgctgacctgtgagctc
tcccgggtggacttcccagcgagctggtacaaggacgggcagcgggtggaggagagtgag
tcgctggtggtgaagctggatggacgcaaacaccgcctgattctgcccgaggcccaaatc
caggacagcggcgagtttgagtgcagaacggaaggggtctcagctttcttcagcgtcacg
gtccgagaccccccagtgcacatcctggacccccgggagcacgtgtttgtgcatgccata
acatcggagtgcgtcatgctgacctgtgaggtggaccgggagggcgccccggtccactgg
tacaaggacgggcaggaagtggaggagagtgacttcgtggtgctggagaacgagggggcc
catcaccgcctcgtgctgcctgctgcccagcctccggacgggggcgagttccagtgcgtt
gctggggacgaacgcgcctacttcactgtcaccatcacagacgtctcctcgtggatcgtg
taccccagcggcaaggtgtacgtggcagccgtgcgcctggagcgcgtggtgctgacctgc
gagctgtgccggccctgggctgaggtgcgctggaccaaggatggtgaagaggtggtggag
agtccggcgctgctcctacagaaggaggacaccgtccgccgcctggtgctgcccgccgtc
cagctggaggactccggcgagtacttgtgtgaaatcgatgatgagtcggcctctttcacc
gtcactgtcacagaacccccagtccgcatcatatacccccgggacgaggtgaccttggtc
gccgtgagcctggagtgtgtggtgctgatgtgtgagctgtctcgggaggacgcccccgtg
cgctggtacaaggatgggctggaggtagaggagagcgaggccctggtgctggagagtgac
gggccccgccgccgcctggtgctgcccgctgcccagccggaggacgggggcgagttcgtg
tgtgacgccggagatgactcagccttcttcactgtcaccgtcacagcccccccagagagg
attgtgcatccagcagctcgcgccctggacctgcagttcggggctccagggcgtgtggag
cttcgctgcgaggtggccccagctggatcccaggtgcgctggtacaaggatgggctggag
gtggaagcatcagacgtcctgcagctgggtgctgaggggcccattcgcaccctgaccctg
ccccatgccgagcctgaggacgccggggagtatgtgtgtgagactcatgatgaagctgtc
accttcaatgtcagcctggctgagccccctgtccagttccttgccccagaggcagccccc
agcccgctctgtgtggcccccggggatccggtggtgctgagctgtgaactgtccagggct
ggcgcccttgtcttttggagccacaacgggaggccagttcaggagggcgagggcctggag
ctccatgctgagggcccccgccgcatcctctgcatccgggctgcagacccggcccatgcg
ggcctctacacctgccagtccggggcagccccgggggctcccagcctcagcttcactgtc
caagtggctgagccccctgtgcgggtggtggcccccgaggcggcccagaccagggttcgc
agcaccccaggcggggacctagagctggcagtgcacctctccgggccggggggccctgtg
cgctggtacaaggacggggagcgcctggcgagccaggggcgggtgcagctggaacaggac
ggggccaggcaggtgctgcgggtgcggggggcacggagcagggacgctggggagtacctg
tgcgacacgccccaggacagccgcatcttcctcgtcagtgtggaagaaccaccgccagtg
aagctggtctcagagctgacacccctaactgtccacgagggtgatgatgccacattccgg
tgtgaagtctccccaccagatgccgatgtcacctggctgcgcaatggggctgttgtcacc
ccagggccccagctagagatggcccagaatgggtcaagccgcaccttgaccctgcgaggc
tgccagcttgaggacgcagggaccgtgactgcccgagcagggggcacagccacaagtgcc
cggctccatgttcgagaaacggagctgctgttcctgcggcgcctgcaggatgtgcgggcg
gaggaaggccaggacgtgtgcctccaagtggagactggccgagtgggtgcagcaggggcc
gtgcgctgggtgcgagggggggtgcccctcccccccgactcccgcctggccacaacgcag
gatggccatgtccaccgcctcctcatccacggcgttgtaccagctgaccagggcacctat
ggctgcgagagccaccacgatcgcaccctggccaggctcagcgtcaggccaaggcagcta
agggtgctgcggcctctggaggatgtgaccatcacggaggggggcagcgccaccttccag
ctggagctatcccaggagggcgtgaccggggagtgggcccggggcggcgtccggctgcag
caggggcccacgtgccaaattcacacagagggccacactcaccacctggtactcagtggc
ctgggcctggccgactccggctgcatctccttcaccgcggatgccctgcgctgtgcggcc
agactcactgtgagagaggccccagtgaccattgtgcaggggccacaggacctagaagtg
accgagggcgacacagctacattcgagtgccagctttcccaggccttggctgacatcacc
tgggagaaggacgggcggcctctcactcccagccctcggctcaggctccaggcccttggc
acacgccgtcttctccagctgcggcgctgcggtcccatggatgccggaacctacagctgc
accgtggggatggcccgcgccgggcccgtccacctggtggtgcgcgagcgcaaggtgtct
gtgctctcggaactccggtcggtgcacgctcgagaaggcgacggagccacattcgagtgc
accttgtcggaggtcgagaccaccgggaactgggagcttggaggccgcccgctgagaccc
ggagggcgcatccgcatccgacaagaaggaaagaaacactttctggtgctgagcgagctg
tgcgcggaggacgctggtgaggtccgcttccaggcgggacccgcccagtctgtggctcag
ctggaggtggaggcactgcctctccagatgtgccgccgcccccctcgcgagaagtcggtt
ctggtcggccgtcgggcggtgctggaggtgaccgtgtcccgctcggggggccaagtgtgc
tggttgcgggagggggtcgagctgtgcccgggagacaagtatgagctgcgcagccatggc
gccacccacagcctggtcatccatgacgtgcgacctgaggaccagggcacctactgctgc
caggccggcgcagacagtgcctacacacagctgctggtggagggtagctag
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