Sus scrofa (pig): 100625897
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Entry
100625897 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: lactase-phlorizin hydrolase
KO
K01229
lactase-phlorizin hydrolase [EC:
3.2.1.108
3.2.1.62
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00052
Galactose metabolism
ssc01100
Metabolic pathways
ssc04973
Carbohydrate digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
100625897
09150 Organismal Systems
09154 Digestive system
04973 Carbohydrate digestion and absorption
100625897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssc03110
]
100625897
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.62 glycosylceramidase
100625897
3.2.1.108 lactase
100625897
Chaperones and folding catalysts [BR:
ssc03110
]
Intramolecular chaperones
Others
100625897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_1
NIT
Motif
Other DBs
NCBI-GeneID:
100625897
NCBI-ProteinID:
XP_020932078
Ensembl:
ENSSSCG00000030013
LinkDB
All DBs
Position
15:16094277..16154467
Genome browser
AA seq
1724 aa
AA seq
DB search
MELAWHLVSIVLLSFSCWGLDWESDRNFILAAGPLTTDLLYDLRGPLGHQDSHFGAGDKG
IYVCRQPLPAFLPEYFSSVHASMITHYKVFLPWAQLLPEGSSKNPDKRMVQCYRQLLEAL
ETAQLQPLVVLHHQTLPASTVQRSEAFADLFADYASFVFHSFGDLVKIWFTFSDLEEVIT
ELPHQESRASHLQILAEAHRKAYEIYHEKYSSQGGKLSVVLQAEAVSQLLTEPSTSVLAK
DAVDFLSLDLSSECQESETSLPQKLRKLQTIEPNVKLFIFSLKLQDCLSTRKNPADVLFS
LLKALNEDQVFTIGFDIHTFLSCSSSSKKSRSCSLTDNLTLQAALQLDPETAVDSSPPRS
AYQAVWETFANQSRAERDALLQGVFPEGFLWGVSTGAFNVEGGWAEDGRGASIWDXTRAP
GHRQGQATPEVASDSYHKVDTDVALLRGLRAQVYKFSISWSRIFPSGQGHSPNLQGVAYY
NKLIDSLLDSHIEPMATLFHWDLPQALQDRGGWQNESVVDAFLDYAAFCFSTFGDRVKMW
VTFHEPWVMSYAGYGTGQHAPGISDPGVASFKVAHLVLKAHARAWHHYNSHHRPRQQGRV
GIVLNSDWAEPLSPERPEDLRASERFLHFMLGWFAHPIFVDGDYPATLRAQVQRVNQGCP
SPVAQLPEFTEVEKQLLKGSADFLGLSHYTSRLISKAHQDTCIPSYDTIGGFSQHVDPTW
PQTASPWIRVVPWGVRRLLRFVSLEYTRGKVPIYLAGNGMPIGDGEDLLHDSSRVTYFNQ
YINEVLKAVKEDSVDVRSYIARSLLDGFEGPSGYSQRFGLYHVNFNDSSRSRTPRKSAYF
LTSMIEKNSLLSKAVKEQPPSSRADIPQKIRAFAFPSEVPSKAKVVWEKFSNQPKFERDL
FYHGTFRDDFLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKDNATGDVACDSYN
QLDADLNMLRALKVKAYRFSISWSRVFPTGRNSSINTRGVDYYNRLIDGLVASNISPMVT
LFHWDLPQALQDIGGWENPALTELFNSYADFCFQTFGDRVKFWMTFNEPTYQAWLGYGSG
DFPPNVKDPGSGPYRIGHAILKAHATVYHTYDEKYRQEQKGVISLSLSTHWAEPQSPGVP
RDVEAADRMLQFSLGWFAHPIFRNGDYPDAMKWKVGNRSELQHLATSRLPSFTEQEKAYI
RATADVFCLNTYSSRIVRHATPRLNPPSYEDDQELTEEEDPSWPSTAVNRAASWGMRRLL
NWIKEEYGDIPIYITENGVGLTDPGVEDTDRIFYHKTYINEALKAYRLDGVDLRGYAAWS
LMDNFEWLNGYTVKFGLYHVDFNNVNRPRTARASARYYTEVITNNGMPLPAEDEFLYGQF
PEGFIWSAATAAYQIEGAWRADGKGLSIWDTFSHTPLKIENNDIGDMACDSYHKIAEDVV
ALQNLGVSHYRLSISWTRILPDGTTKYINEAGLDYYVRLIDALLAANIQPQVTIYHWDLP
QALQDVGGWENETIVQRFKEYADVLFQRLGDKVKFWITLNEPFVVAQQGYGSGTFAPGIS
SRPGTAPYIVGHNLIKAHAEAWHLYNDVYRASQGGVISITINSDWAEPRDPSNQEDVEAA
RRYVQFMGGWFSNPIFKNGDYPEVMKTRIRDRSLAAASTSLGCPSSQRVRRGGSMAPMTF
LGSITTPLSWPTISTLTLPSPPLKRTGEWPRLQIALGQTLAPSG
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggagctggcttggcatttagtctctattgtcctcctaagtttttcttgctggggatta
gactgggaatctgatagaaacttcattttagctgctggtcctctaaccactgacttgcta
tacgacctgaggggtccactgggacaccaggattctcactttggagcaggagacaaaggt
atttatgtgtgtcgccagccactgcctgctttcttgccagagtattttagcagtgttcat
gccagtatgatcacccactataaggtatttctaccttgggcacaacttctcccagaagga
agctccaagaacccagacaagagaatggtgcagtgctaccggcaactccttgaggccctt
gagactgctcaacttcagcccctggtggtcctgcaccaccagaccctccctgccagcacc
gtccagagaagtgaggcctttgctgatctctttgctgactatgcctccttcgtcttccac
tcttttggggacctagttaagatctggttcacttttagtgacttggaggaggtgataaca
gaacttccccaccaggaatcaagagcgtcacatctccagatcctcgctgaggcccataga
aaagcctatgaaatttaccacgaaaaatattcttctcaaggcggaaagctctctgtggtc
ctacaagctgaagcagtctcccagctcctgacagaaccatccacgtctgtccttgccaag
gatgcagtcgacttcctctctcttgatttgtcttctgaatgtcaagaaagtgagacaagt
ttaccacagaagctgagaaaattgcagaccattgagccaaatgtgaaacttttcatcttc
agtctgaaactccaggactgcctctccaccaggaagaacccagccgatgtgctcttcagc
ctcctcaaagccctaaatgaagaccaagtgttcaccattgggtttgatattcatacattc
ctgagctgttcttcaagttccaagaaaagcaggtcttgttctctgactgacaacctgacg
cttcaggctgccctgcagctggacccggagacagcagtagactcctcaccgccccgctcg
gcgtatcaggccgtctgggagacgtttgccaaccagtccagggcagaacgggatgctctc
ctgcagggtgtttttcccgaaggcttcctctggggcgtctccacaggagcctttaacgtg
gaaggaggctgggctgaggacggaagaggggcaagcatctgggacnagactcgggcacca
ggacaccgccaaggccaagcgacgccggaggtggccagtgacagttaccacaaggtggac
actgacgtggccctgcttcgtggcctccgggcccaggtgtacaagttctccatctcctgg
tcccgcatcttcccctctgggcaggggcacagccccaacctccagggcgtcgcctactac
aacaagctcatcgacagcctgctggactcccacatcgagccgatggccaccctgttccac
tgggacctgcctcaggccctgcaggatcgtggggggtggcagaatgagagtgtggtggat
gccttcctggactatgcggccttctgcttctccacttttggggaccgtgtgaagatgtgg
gtgaccttccacgagccgtgggtgatgagctatgcgggctacggcaccggtcagcatgcg
ccaggcatctctgacccaggggtggcctcttttaaggtggctcacttggtcctcaaggct
cacgccagggcttggcaccactacaacagccaccatcgcccaaggcagcaggggcgtgtg
ggcattgtgctgaactctgactgggcagaacccctgtccccagagaggcccgaggacctg
agagcatctgaacgcttcctgcacttcatgctgggctggtttgcacaccccatctttgtg
gatggagactacccagccaccctgagggcccaggtccaacgggtgaaccagggctgcccc
agtcccgtggcccagctccctgagttcaccgaggtggagaagcagctcctgaaaggctct
gccgactttctaggcctgtcccattacacttcccgcctcatcagcaaggcccaccaagat
acctgcatccccagctatgataccatcggaggcttctcccaacacgtggaccccacgtgg
ccccagaccgcgtccccttggatccgtgtggtgccctggggtgtaaggaggctgttgcgg
tttgtatccttggaatacacaagaggaaaagttccaatctacctggctggaaatggcatg
cccataggggacggtgaagatctcctccatgattcttcgagagtcacctacttcaaccaa
tatatcaatgaggtgctcaaggctgtcaaggaggactctgtggatgttcgatcttacatt
gctcgttctctcctcgatggcttcgaaggcccctctgggtacagccagaggtttgggctg
tatcacgtcaacttcaacgacagcagcaggtcaaggactcccaggaaatctgcctacttt
ctcaccagcatgattgaaaagaacagtctcctcagcaaggcagtcaaagaacagccacca
tccagtagagcagacatcccccagaaaatcagagccttcgcttttccatccgaggtgccc
tccaaggctaaggtagtttgggaaaagttctccaaccagcccaagtttgagagggatttg
ttctaccatggcacgttccgggatgactttctgtggggcgtgtcctcatcggcctatcag
attgaaggagcttgggatgctgacggcaaaggccccagcatctgggataactttacccac
accccagggagcaacgtgaaagacaatgccactggagacgtagcctgcgacagctataac
caactggatgccgacctgaatatgcttcgagctttgaaggtgaaggcctatcgcttctcc
atctcctggtctcgggttttcccaaccgggagaaacagttccatcaacacacgtggtgtc
gattattacaacaggctgatcgacggcttggtggcaagcaacatctctcccatggtgaca
ctcttccactgggacctgccccaggccctccaggatattggaggctgggagaatcctgcc
ttgactgagttgtttaacagctatgcagacttttgtttccagacctttggtgacagagtc
aagttctggatgacttttaacgagcccacgtatcaggcgtggttggggtatggctcaggg
gatttccccccaaacgtgaaggacccaggctcgggaccttacaggattggccatgcaatc
ctcaaagctcatgccacggtctatcacacgtacgatgagaaatacaggcaagagcagaag
ggggtcatctctctgagcctcagtacacactgggcagagccccagtcgccgggggtgccc
agggacgtggaggcagctgaccggatgctacagttctcactgggctggttcgcccacccc
attttccgcaacggagactatcccgacgccatgaagtggaaagtgggcaacaggagtgag
ctacagcacttagccacgtcccgcctgcccagcttcactgagcaagagaaggcctacatc
agggccacggccgacgtcttctgcctcaacacctactcctccagaatcgtgcggcatgca
acacccaggttaaacccgccctcctacgaagacgaccaggagctgacggaggaggaagat
ccttcctggccttcgacagcagtgaacagagctgcgtcttgggggatgcgaagactgctc
aactggatcaaggaagagtatggcgacatccccatttacatcacagaaaacggagtgggg
ctgacagatccgggagtggaagataccgataggatattttaccacaaaacctatatcaat
gaagctttgaaagcctacaggctcgatggtgtcgaccttcgaggctatgcagcatggtct
ctgatggacaactttgagtggctgaacggatacacagtcaagtttggactgtaccatgtt
gatttcaacaatgtgaatagacctcgcactgcaagagcctccgccaggtactacacagag
gtcatcaccaacaacggcatgcccctgcccgcggaggatgagtttctgtatggccagttt
cccgagggcttcatctggagtgcggctactgctgcatatcagatcgaaggtgcatggaga
gcagatggcaaaggactcagtatttgggacacgttttctcacacaccactgaagattgag
aacaatgacattggagatatggcctgtgacagttatcacaagattgctgaggatgtagtc
gccctgcagaacctgggtgtgtcccactatcgactttccatctcttggactcgcatcctc
cctgatggaaccaccaagtacatcaatgaagcaggcctggactactatgtgcggctcatt
gacgccctgctggctgccaacatccagccccaggtgaccatttaccactgggacctgccc
caggcacttcaggatgttggaggctgggagaatgagaccattgtgcagcggtttaaggag
tatgcagatgtgcttttccagaggctaggggacaaggtgaagttttggatcacactgaat
gagccctttgttgtggctcagcaaggctacggttctggaacatttgctccaggaatctcc
tctaggcctggcactgccccctacattgttggccacaacctaatcaaggctcatgctgag
gcctggcatctgtacaatgatgtgtaccgcgccagtcaaggtggcgtgatttctatcacc
atcaacagcgactgggctgagcctagagacccttccaaccaggaggatgtggaggcagcc
aggagatacgttcagtttatgggaggatggttctcgaatcctattttcaagaatggagat
taccccgaggtgatgaagacacggatccgggacaggagcttggccgcggcctcaacgagt
ctcggctgcccgagttcacagagagtgagaagaggaggatcaatggcacctatgactttt
ttgggttcaatcactacaccactgtcctggcctacaatctcgactctgactcttccatct
cctcctttgaagcggacaggggagtggcctcgattacagatcgctcttggccagactctg
gctccttctggctga
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integrated database retrieval system