KEGG   Sus scrofa (pig): 100627559Help
Entry
100627559         CDS       T01009                                 

Gene name
HDAC7
Definition
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 7
  KO
K11408  
histone deacetylase 7 [EC:3.5.1.98]
Organism
ssc  Sus scrofa (pig)
Pathway
Alcoholism
Human papillomavirus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    100627559 (HDAC7)
  Substance dependence
   05034 Alcoholism
    100627559 (HDAC7)
  Infectious diseases
   05165 Human papillomavirus infection
    100627559 (HDAC7)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100627559 (HDAC7)
Chromosome [BR:ssc03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100627559 (HDAC7)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
5
AA seq 981 aa AA seqDB search
MHNPGADGTQVSPGAHGPSLPGTGCPRPRTDTPGPQPQPMDLRVGQRPLVEPPPEPSLLA
LQHTQRLPHHLFLGAVQPQRSVEPMRLSMDTMPELQVGQQEQELRQLLNKDKSKRSAVAS
SVVKQKLAEVILKKQQAALEKTVHPNSPSVPYRTLEPLETEGAARSMLSSFLPPVPSLPS
DPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSS
STPASGCSSPNDSEHGPNPVLGSEALLGQRLRLQETSLAPFALLPTITLGLPAPARADGD
RRTHPTLGPRGPVLGXPHAPLFLPHGLEPEAGGPLPSRLQPILLLDPSVSHAPLLTVPGL
GPLPFHFAQSLMTSERLSGSGLHRPLSRTRSEPLPPSAPLGALQPRLERLKPHVQLIKRP
AKPSEKPRLRQIPSAEDLETDAGGLGPVGEDGLEHRESSHGQHEARGPVPLQQHQQVFLW
EQQRLAGRLPRGGAGDPVLLPLAQGGHRPLSRAQSSPAAPASLPTPEPPSQARVLPSSET
PTRTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRK
ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE
LHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ
LQQQGKAGKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGS
GEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPPPLG
GYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEG
WKQKPNLNAIRSLEAVIRVHSEYWGCMQHLASCPDSWVPRVPGADAEEVEAVTALASLSV
GILAEERTSVQLVEEEEPMNL
NT seq 2946 nt NT seq  +upstreamnt  +downstreamnt
atgcacaaccccggcgctgatgggacccaggtgagcccgggtgcccacggccccagcctc
cctggcacaggctgcccccggccacgcacagacacgccaggccctcagccccaacccatg
gacctgcgggtggggcagcggcccctggtggagcccccgccggagccctcgctgctggcc
ctgcagcacacccagcgcctgccccatcacctcttcctgggggccgtgcagcctcagcgc
tcggtggagcccatgaggctctcaatggacacgatgcccgagttgcaggtggggcagcag
gagcaagagctgcggcagcttctcaacaaggacaagagcaagcggagtgccgtagccagc
agtgtggtcaagcagaagctggcagaggtgatcctgaagaagcagcaggcagccttagag
aaaacagttcatcccaacagccccagcgtcccctacagaactctcgagcccttggagacg
gaaggagctgcccgttccatgctcagcagcttcctgcctcccgttcccagcctgcccagc
gaccccccagaacactttcctctgcgtaagacagtctctgagcccaacctgaagctgcgt
tacaagcccaagaagtccctggagcggaggaagaaccccctgctccggaaggagagtgcc
ccgccgagcctccggcggcggccggcagagaccctcggcgactcctcccccagtagcagc
agcacgccggcgtcagggtgcagctcccccaatgacagcgagcatggccccaacccagtc
ctgggctccgaggcgctcttgggccagcggctgcggctgcaggagacctctctggccccg
ttcgccttgctgcccacaatcacgctggggctgcccgcccctgccagggctgatggtgac
cgcaggacccatccgactctgggcccccggggaccggtcctggggnagccccatgctccc
ctctttctgccccacggcctggagcccgaggccgggggccccctgccctcccgcctgcag
cccattctcctcctggatccctcagtctctcacgcccccctgctgactgtgcccgggctt
gggcccctgcccttccactttgcccagtccttaatgaccagcgagcggctctccgggtca
ggcctccaccggcccctgagccggacccgctcagagcccctgcccccaagcgcaccgctg
ggtgccttgcagccccgcctggagcggctcaaacctcatgtccagctgatcaagaggcca
gccaagccgagtgagaagccccgactgcggcagataccctcagccgaggacctggagacg
gacgctgggggactggggccagtgggggaggatggcctggaacacagggagtccagccac
gggcagcatgaggccaggggccctgttcctctgcagcagcaccagcaggtgttcctctgg
gagcagcagcgactggccgggcgactgccccggggaggcgctggggaccccgtgctgctt
cccctggcccagggcggtcaccggcccctgtccagggctcagtcgtccccagccgcaccc
gcctcactgccaaccccggagcctcccagccaggcccgtgtcctgcccagctcagagacc
cccaccaggaccctgcccttcaccacagggctggtttatgactcggtaatgctgaagcac
cagtgctcctgtggggacaacagcaggcatccggagcacgcaggccgcatccaaagcatc
tggtcccggctgctggagcgggggctccggagccagtgtgagtctctccggggccggaag
gcctccctggaggagctgcagtctgtgcactccgagcgccacgtgctcctctatggcacc
aacccgctcagccgcctcaaactggacaatgggaagctggcagggctcctggcacagcgg
atgtttgtgatgctgccctgtggtggggttggggtggacaccgacaccatctggaatgag
ctgcactcctccaacgcggcccgctgggcggcaggcagcgtcaccgacctcgccttcaaa
gtggcctcccgggagctcaagaacggttttgctgtggttcggcccccaggacaccacgca
gaccattccacagccatgggcttctgcttcttcaactcggtggccatcgcctgccggcag
ctgcaacaacaaggcaaggccggcaagatcctcattgtggactgggacgttcaccacggc
aatggcacccagcagaccttctaccaggaccccagtgtgctctacatctcccttcatcgc
catgacgatggcaacttcttcccgggcagcggggctgtggatgaggtgggagctggcagc
ggtgagggcttcaatgtcaacgtggcctgggctggaggtctggaccccccaatgggggat
cccgaatacctggctgccttcaggacggtcgtgatgcccatcgcccgagagttctctccg
gacctggtcctcgtgtccgcgggctttgatgctgccgagggccacccgcccccgctgggt
ggctaccatgtctccgccaaatgttttggctacatgacgcagcagctgatgagcttggcg
ggaggtgcggtggtgctggccttggagggcggccatgacctcacagccatctgtgacgcc
tccgaggcctgtgtggctgctcttctaggcaacaaggtggatcccctctcagaagaaggc
tggaaacagaaacccaacctcaacgccatccgctccctggaagctgtgatccgggtgcac
agtgaatactggggctgcatgcagcacctggcctcctgtccagactcctgggtacccagg
gtgccaggggccgacgcagaggaagtggaggcagtgactgcactggcatccctctccgtg
ggcatcctggctgaagagcggacctcagtgcagctggtggaggaggaagaacccatgaat
ctctaa

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