Sus scrofa (pig): 100627559
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Entry
100627559 CDS
T01009
Symbol
HDAC7
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 7
KO
K11408
histone deacetylase 7 [EC:
3.5.1.98
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04613
Neutrophil extracellular trap formation
ssc05034
Alcoholism
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100627559 (HDAC7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100627559 (HDAC7)
09165 Substance dependence
05034 Alcoholism
100627559 (HDAC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100627559 (HDAC7)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100627559 (HDAC7)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100627559 (HDAC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100627559
NCBI-ProteinID:
XP_020948263
LinkDB
All DBs
Position
5:complement(78150554..78186051)
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AA seq
981 aa
AA seq
DB search
MHNPGADGTQVSPGAHGPSLPGTGCPRPRTDTPGPQPQPMDLRVGQRPLVEPPPEPSLLA
LQHTQRLPHHLFLGAVQPQRSVEPMRLSMDTMPELQVGQQEQELRQLLNKDKSKRSAVAS
SVVKQKLAEVILKKQQAALEKTVHPNSPSVPYRTLEPLETEGAARSMLSSFLPPVPSLPS
DPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSS
STPASGCSSPNDSEHGPNPVLGSEALLGQRLRLQETSLAPFALLPTITLGLPAPARADGD
RRTHPTLGPRGPVLGXPHAPLFLPHGLEPEAGGPLPSRLQPILLLDPSVSHAPLLTVPGL
GPLPFHFAQSLMTSERLSGSGLHRPLSRTRSEPLPPSAPLGALQPRLERLKPHVQLIKRP
AKPSEKPRLRQIPSAEDLETDAGGLGPVGEDGLEHRESSHGQHEARGPVPLQQHQQVFLW
EQQRLAGRLPRGGAGDPVLLPLAQGGHRPLSRAQSSPAAPASLPTPEPPSQARVLPSSET
PTRTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRK
ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE
LHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQ
LQQQGKAGKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGS
GEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPPPLG
GYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEG
WKQKPNLNAIRSLEAVIRVHSEYWGCMQHLASCPDSWVPRVPGADAEEVEAVTALASLSV
GILAEERTSVQLVEEEEPMNL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaccccggcgctgatgggacccaggtgagcccgggtgcccacggccccagcctc
cctggcacaggctgcccccggccacgcacagacacgccaggccctcagccccaacccatg
gacctgcgggtggggcagcggcccctggtggagcccccgccggagccctcgctgctggcc
ctgcagcacacccagcgcctgccccatcacctcttcctgggggccgtgcagcctcagcgc
tcggtggagcccatgaggctctcaatggacacgatgcccgagttgcaggtggggcagcag
gagcaagagctgcggcagcttctcaacaaggacaagagcaagcggagtgccgtagccagc
agtgtggtcaagcagaagctggcagaggtgatcctgaagaagcagcaggcagccttagag
aaaacagttcatcccaacagccccagcgtcccctacagaactctcgagcccttggagacg
gaaggagctgcccgttccatgctcagcagcttcctgcctcccgttcccagcctgcccagc
gaccccccagaacactttcctctgcgtaagacagtctctgagcccaacctgaagctgcgt
tacaagcccaagaagtccctggagcggaggaagaaccccctgctccggaaggagagtgcc
ccgccgagcctccggcggcggccggcagagaccctcggcgactcctcccccagtagcagc
agcacgccggcgtcagggtgcagctcccccaatgacagcgagcatggccccaacccagtc
ctgggctccgaggcgctcttgggccagcggctgcggctgcaggagacctctctggccccg
ttcgccttgctgcccacaatcacgctggggctgcccgcccctgccagggctgatggtgac
cgcaggacccatccgactctgggcccccggggaccggtcctggggnagccccatgctccc
ctctttctgccccacggcctggagcccgaggccgggggccccctgccctcccgcctgcag
cccattctcctcctggatccctcagtctctcacgcccccctgctgactgtgcccgggctt
gggcccctgcccttccactttgcccagtccttaatgaccagcgagcggctctccgggtca
ggcctccaccggcccctgagccggacccgctcagagcccctgcccccaagcgcaccgctg
ggtgccttgcagccccgcctggagcggctcaaacctcatgtccagctgatcaagaggcca
gccaagccgagtgagaagccccgactgcggcagataccctcagccgaggacctggagacg
gacgctgggggactggggccagtgggggaggatggcctggaacacagggagtccagccac
gggcagcatgaggccaggggccctgttcctctgcagcagcaccagcaggtgttcctctgg
gagcagcagcgactggccgggcgactgccccggggaggcgctggggaccccgtgctgctt
cccctggcccagggcggtcaccggcccctgtccagggctcagtcgtccccagccgcaccc
gcctcactgccaaccccggagcctcccagccaggcccgtgtcctgcccagctcagagacc
cccaccaggaccctgcccttcaccacagggctggtttatgactcggtaatgctgaagcac
cagtgctcctgtggggacaacagcaggcatccggagcacgcaggccgcatccaaagcatc
tggtcccggctgctggagcgggggctccggagccagtgtgagtctctccggggccggaag
gcctccctggaggagctgcagtctgtgcactccgagcgccacgtgctcctctatggcacc
aacccgctcagccgcctcaaactggacaatgggaagctggcagggctcctggcacagcgg
atgtttgtgatgctgccctgtggtggggttggggtggacaccgacaccatctggaatgag
ctgcactcctccaacgcggcccgctgggcggcaggcagcgtcaccgacctcgccttcaaa
gtggcctcccgggagctcaagaacggttttgctgtggttcggcccccaggacaccacgca
gaccattccacagccatgggcttctgcttcttcaactcggtggccatcgcctgccggcag
ctgcaacaacaaggcaaggccggcaagatcctcattgtggactgggacgttcaccacggc
aatggcacccagcagaccttctaccaggaccccagtgtgctctacatctcccttcatcgc
catgacgatggcaacttcttcccgggcagcggggctgtggatgaggtgggagctggcagc
ggtgagggcttcaatgtcaacgtggcctgggctggaggtctggaccccccaatgggggat
cccgaatacctggctgccttcaggacggtcgtgatgcccatcgcccgagagttctctccg
gacctggtcctcgtgtccgcgggctttgatgctgccgagggccacccgcccccgctgggt
ggctaccatgtctccgccaaatgttttggctacatgacgcagcagctgatgagcttggcg
ggaggtgcggtggtgctggccttggagggcggccatgacctcacagccatctgtgacgcc
tccgaggcctgtgtggctgctcttctaggcaacaaggtggatcccctctcagaagaaggc
tggaaacagaaacccaacctcaacgccatccgctccctggaagctgtgatccgggtgcac
agtgaatactggggctgcatgcagcacctggcctcctgtccagactcctgggtacccagg
gtgccaggggccgacgcagaggaagtggaggcagtgactgcactggcatccctctccgtg
ggcatcctggctgaagagcggacctcagtgcagctggtggaggaggaagaacccatgaat
ctctaa
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