Sus scrofa (pig): 110259388
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Entry
110259388 CDS
T01009
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110259388 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
110259388 (DDX41)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110259388 (DDX41)
Spliceosome [BR:
ssc03041
]
Complex C
Other components
Complex C specific factors
110259388 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110259388
NCBI-ProteinID:
XP_020940030
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All DBs
Position
2:80433065..80445484
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AA seq
622 aa
AA seq
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MEESEPERKRARTDEATATGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatccgaaccagagaggaagcgggctcgcaccgacgaggcaactgccacagga
agccgctccgaggcggaggatgaggacgatgaggattatgtaccctacgtaccactgcga
cagcgccggcagttgctgctccagaagctgcttcagcgaaggcgcaagggagctgcggaa
gaggagcagcaggacagcggcagcgaaccccgaggagatgaggacgacatcccgctgggc
cctcagtccaacgtcagccttctggatcagcaccagcacctcaaagagaaggctgaagcc
cgcaaagagtctgccaaggagaagcagctgaaggaagaggagaagatcctggagagtgta
gctgaaggtcgagccttgatgtcagtgaaggagatggctaagggaatcacatacgacgac
ccgatcaaaactagttggacaccaccccggtatgttctgagcatgtctgaagagcggcat
gagcgtgtacggaagaagtaccacatcttggtggaaggtgatgggatcccaccacccatc
aagagtttcaaggaaatgaaatttcctgcagccatcctgagaggcctaaagaagaagggc
atccaccacccaacacccattcagatccagggaattcccaccattctctcaggccgagac
atgataggcattgccttcacgggttcaggcaagacactggtgttcaccctgcccgtcatc
atgttctgcctggaacaagagaagaggttacctttctctaagcgcgaagggccctatgga
ctcattatctgcccctcgcgggagctggcccggcagacccacggcatcctggagtattac
tgccgcctgctgcaggaggacagctcgccactcctgcgctgtgccctctgcatcgggggc
atgtctgtcaaagagcagatggagaccatccgacatggcgtgcacatgatggtggccaca
cctgggcgcctcatggatctgctgcagaagaagatggtcagcctggacatctgccgttac
ctggccctggatgaggctgaccgcatgatcgacatgggttttgagggcgacatccgtacc
atcttctcctacttcaagggccagcgacagaccctgctcttcagtgccaccatgcctaag
aagattcagaatttcgccaagagcgccttggtaaagcctgtcacgatcaacgtggggcgc
gccggggctgccagcctggatgtcatccaggaagtggaatacgtgaaggaggaagccaag
atggtgtacctgctcgagtgcctgcagaagacaccgccgcccgtgctcatctttgcggag
aagaaggcagatgtagacgccatccacgagtacctgctgctcaagggagtcgaggctgtg
gccatccatgggggcaaagaccaggaggaaaggaccaaggccatcgaggcgttccgggag
ggcaagaaggatgtcctggtagccacagacgtagcctccaagggcctggacttccctgcc
atccagcatgtcatcaattatgacatgcctgaggagatcgagaattatgtgcaccgtatc
ggccgcactgggcgctcaggaaacacaggcatcgccaccaccttcatcaacaaggcctgt
gatgagtcagtgctgatggacctcaaagccctgctgctggaggccaagcagaaagttcca
cctgtgctgcaagtgctacactgtggagacgagtccatgctggacattggaggagagcgt
ggctgtgctttctgtgggggcctgggccatcggatcactgactgccccaaactcgaggct
atgcagacgaagcaggttagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga
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