Sporothrix schenckii: SPSK_02316
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Entry
SPSK_02316 CDS
T05555
Name
(RefSeq) polyadenylation factor subunit 2
KO
K15542
polyadenylation factor subunit 2
Organism
ssck
Sporothrix schenckii
Pathway
ssck03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPSK_02316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_02316
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SPSK_02316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
27664465
NCBI-ProteinID:
XP_016589146
UniProt:
A0A0F2MCC9
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MAYDPRGDYGGGGGGGGGGGGRYGQDGGRYGGQDGGRFGGQDGEGFVRVRGRRPVTDYGA
SLVHWMRHRHPKYRNAYGGESERPSVSYIVDMLPPVARITNAADTVPTRHLHSSLNKIKH
PVNVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRALAYSYSDDWLISAD
HDGNIKYWQPNFNNVENLSAHTDPIRDLAFAPTDAKFVTASDDSTLKIYDFAAARPEATL
TGHGWDAKTCDWHPTKGLVVSGSKDHLVKLWDPRSGRCLTTLHGHKNTITKTSFERVHGW
CLATAARDQTARVFDLRTMRDICLLRGHDKDVSTLAWHPVHGNLLSTGGGDGALFHYLLD
EPNTPPGQAVTVAPYDSPDPSTAPAQSIYPAHRVPYAHDFAIWSLDWHPLGHILVSGSND
RVTRFWTRARPGEDVSRDRYHIGEAAAEAQGTWDRRGNRRQRQEEEEQEMEDEAEGLVDQ
KMPLKQQQAAAAAAAAAAADAAAHGGGAVPPPPMLPGLSLPGLGGATSGRGGAGLGMIPP
PPPPPPPGVLAAGGALPPLIPGVDMKNPPDPATMLELMKKAGFQLPPPPPGSHFPPIPPP
PLPAGVGGMVPPPPPPPGFQGALPGLGGGGIPGIPGLPGLGAEQQGQRNRAPLPSQADSL
REEQKRGQYTQRR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgatccacgaggggactacggcggtggcggcggcggcggtggtggtggtgga
ggtcggtatggccaggacggcggccggtacggaggccaagatggagggcggtttggcggc
caggacggcgaaggctttgtcagagttcggggacggcgacccgtgaccgattacggcgca
agcctggtgcattggatgcgccatcgacatcccaagtaccgcaatgcatacggcggcgag
tccgagcggccgagcgtgagctacattgttgacatgctcccaccagtggctcgtattacg
aatgccgccgataccgttcccacacgccacctacactcgtctctcaacaagatcaagcac
cccgtcaacgtcgtgcgctggacacccgagggccgccgcctgctgaccgcctcgagcagc
ggcgagttcacgctctggaacggcacgggattcaactttgagaccatcatgcaggcccac
gactcggccatccgcgcgctcgcgtactcgtacagcgacgactggctcatatcggccgac
cacgacggcaacatcaagtactggcagcccaacttcaacaacgtcgagaacctgtcggca
cacaccgacccgattcgcgacctggcgtttgccccgaccgatgccaagtttgtcacggcg
tcggacgactccacgctgaaaatctacgactttgccgccgcgcggcccgaggcgacactg
accggtcacggctgggacgccaagacgtgcgactggcacccgaccaagggcctggtggtg
tcgggctccaaagaccatctggtcaagctctgggacccgcggtccggccggtgcctgacg
acgctgcacggccacaaaaacaccattacgaaaacgtcgtttgagcgcgtgcacggctgg
tgcctcgccacggcggcgcgggaccagacggcgcgcgtctttgacctgcgcaccatgcgc
gacatttgcttgctgcgcggccacgacaaggacgtgtcgaccctggcgtggcacccggtc
cacggcaacctgctgagcacggggggcggcgacggcgcgctgttccactacctgctcgac
gagccaaacaccccgccgggccaggccgtcaccgtcgcgccgtacgacagccccgacccc
tcgaccgcccccgcccagagcatctacccggcccaccgcgtgccctacgcgcacgatttt
gccatctggtcgctcgactggcacccgctgggccacattctggtgtccggctccaacgac
cgcgtcacgcggttctggacgcgcgcgcggccgggcgaagacgtgtcgcgcgaccggtac
cacattggcgaggcggccgccgaggcgcagggtacatgggaccggcggggcaaccggcga
cagcggcaggaagaggaggagcaggagatggaggacgaggccgagggtcttgtcgaccaa
aaaatgccgctcaaacagcagcaggcggcggccgccgccgccgccgccgctgcagcagac
gctgcagcacatggtggcggcgctgtgccaccaccaccgatgctgcccggtctgtcgctg
cccggcctcggtggtgcgaccagtggacgtggtggtgctggtctaggtatgatcccgccg
ccgccaccaccgccgccgccgggcgtcctggccgcgggtggggcactgccgccactgatt
ccgggcgtcgacatgaagaaccctcccgatccggcgacgatgctggagttgatgaagaag
gccggcttccagctgccaccgcccccaccaggaagccatttcccgcccattccaccaccg
ccactgccagcaggcgtaggtggcatggtcccgccgccgccgccgccacctggcttccag
ggggccctgccagggctgggtggtggcggcattcccggcattcccggtctgccgggtctc
ggtgccgagcagcagggccagcggaatcgtgcaccactgcccagccaagcagacagtctc
agggaagagcagaagcgggggcagtacacgcagcggcggtag
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