Syngnathus scovelli (Gulf pipefish): 125966646
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Entry
125966646 CDS
T08785
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia isoform X1
KO
K10635
E3 ubiquitin-protein ligase Arkadia [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125966646
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125966646
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125966646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF111_N
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125966646
NCBI-ProteinID:
XP_049572948
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MKSEVPSEASSRQEHLKEPLVNPEPMEAAKNFSSNMEVIGMADSEFATLCSESRRRTLRD
TAAHKDSERGLPGRRKRKVQQAGPSDFKVGHFSETSVAPQRPREELLRHSSEDEHNHESS
FSDCASSPSSSLRFGDSETLSSEEDVEAGPTGGQQKAPAVTTPATGVSLRPVVGRTRRTR
SHKWVRSEAEPVLLNRPCLSSRRTLHRKRFVKSVPGGGQRTQKQKERLLLQRKKREVIAR
RKYALLNSTSSSSEELSSGSSSPSSTEVEDELYVDVSSTSSLPNSAAVAAGALDEDVVVI
DATPAPAPAVPASEEINVTSTDSEVEIVTIGDSFRSRSLGGLGRIWANSCSQSRLQEPRG
RHRLSTVIQPLRQNSGEVVDLTVDEDDLSVVPTTSGSILPQTVRSSSSSSSQHASTSELN
DAAGPSTSCPGSVPNNMRTPRPSGSTRIAAEADDSRSGLSGSAGDTTGTAMPRLPSCCQQ
HSPCGRPSPGHLSLSHSHSSCMQASSSQANGSQHGHGNAHHFVLHVHHPTPQPPGTLPFQ
EPSCAVERPSALPATCAGVSGGSSNSGNGNNTAHYHEQQTLPVDLSNSSVRSSGASFHGS
TSAFDPCCPGSTSRPPPYVSQATPGPSQPAAVDSFSSGMAAQPQTQLQQPCRHYIHPSYG
SLARSLHHQPSTACPHSHGNPQLTPQPPPQGDYVLPHNVHSFHPPLPSHPSGHTVPSGPP
LAAHHLSSSSAPLTQHLPPDHQTLPHHMPPLGSVQRLHQHEMLQRMEVQRRRMMQHPTRA
HERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQPEQRTAWELGIEAGVTVASYPSGHLHS
HLHHYHPTSRLHHFPIPFMHTGISEVTYPHIRYISSRMTGFGRTYEDLLHLEERLGTVNR
GASQGTIERCTYPHKYKKKVLERDIDQQLTPEAWASIGKNMHASPESRKLHGKQDEDEGA
DEDTEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDIEAQLSAES
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaagtgccgtctgaggcctccagcagacaggagcatctgaaggagccgctg
gtgaacccggagcctatggaagcagccaagaacttctctagcaatatggaggtgattgga
atggcagacagcgagtttgctaccctgtgttccgaatcgaggcgtcggaccttgagggat
acggcggctcacaaggactcggagcgaggcctccctggacgcagaaaaagaaaagtccaa
caggctggaccgtctgactttaaagtcggacattttagcgagacttccgtggcccctcag
cgtcccagggaagaactcttacgacactctagcgaggatgaacacaaccatgagtcatct
tttagtgactgtgcctcgtccccttcctccagcttgcgattcggtgactctgagacactg
agctccgaggaggatgtggaagctggaccgacggggggccaacaaaaagcccccgccgtc
acgacgccagccaccggagttagtcttcgccccgttgtgggtcgaacgaggcggacccgc
tcgcataagtgggtgcgctccgaggcggagccggtgttgctgaatcggccctgtttgagc
agtcggcggactctgcataggaaacgatttgtgaaatcagttcctgggggagggcagcgt
acgcagaagcaaaaggagcgactattactgcagaggaagaaacgggaagtgattgcacga
cgaaaatatgctttactcaatagcacaagtagttcaagcgaggagctgagcagtggctcg
tcttccccttcctcgaccgaagtggaggatgagctctatgtggatgtcagcagcaccagc
agcctgcccaacagtgctgcagtagccgcaggcgctctggatgaggacgtggtggtgatc
gacgctactccggctccggcacctgccgtccctgccagcgaggagatcaacgtcacctcc
acagacagcgaggtggaaatcgtcacaattggagatagtttcaggtcgcgctctttgggt
ggtcttggtaggatatgggctaacagttgctctcagagccgtctccaggagccccgagga
cgccacagactgtccaccgtcatccagccgctgcgtcagaactctggagaggtggttgac
ctaactgttgatgaagatgacctctcagttgtgccaacaacctctggcagcattctccct
caaacagtcaggtcgtcctcgtcgtcatcttcccagcatgcctctacctcagagctcaat
gatgccgccggtccctccactagctgcccaggctcagtccccaacaatatgcgcacacca
aggccgagtggctcgacccgaatagccgctgaggcagatgacagcagatcaggcttgtca
ggttcagcgggagacaccacaggcacggccatgcccaggctgccgtcgtgctgtcagcag
cactcgccatgcggaaggccctcccccggtcatctgtccctcagccactcccattcgagc
tgcatgcaggcctcgtcctctcaggccaacggctcccagcacggtcacggcaacgcgcac
cattttgtccttcatgtccaccaccccacaccgcagcccccgggtaccctgccattccaa
gagccgagctgtgctgtggaaaggcccagtgcgctccctgcaacctgtgccggagtgagc
ggcgggagcagcaatagtggaaacggcaacaacacagcccattaccacgagcagcaaacg
ctgccagtggacctgagcaacagtagcgttcgaagcagcggtgctagtttccatggcagc
acgtcagcctttgacccctgctgcccaggctccacctcccggcctcctccctacgtttcc
caggccacgcctggccctagccagccagctgcggtcgactctttcagctccggcatggcg
gcccagcctcaaacacagctacagcagccatgcagacattacatacacccctcatatggc
tcgctggcacgctcattgcatcatcagccttccactgcctgtcctcattcgcacgggaac
cctcaacttacacctcagcctcctccacaaggcgactatgtccttccccacaatgtccac
tcctttcatccaccgctgccatcccatccgtcaggccacactgtacccagtggccctcct
ctagccgcccaccacctctccagttccagtgccccgctgacgcagcacctgcccccggac
caccagaccctgccgcaccatatgccaccactaggatcagttcaacggctccatcaacac
gaaatgttgcagaggatggaggttcaaaggcgcagaatgatgcagcaccccacgcgagca
cacgagcgtcctcctccccaccctcacagaatgcaccccaactacggccacgggcaccac
atccatgtgccgcagaccatgtcttcccaccctcgccagccggagcagagaaccgcatgg
gagctcggcatcgaggctggagtgactgtggcgtcgtacccttcggggcacctgcactcc
cacctgcaccattaccaccccacttccagattgcaccacttccctatccccttcatgcac
actggtatatctgaagtcacctacccacacattcgctacatctcatctcgaatgactggc
tttggaagaacctacgaggacctgctgcatttagaggaaagacttgggacggtgaaccga
ggagcctctcagggaaccatagagaggtgcacttacccacacaaatacaaaaagaaggtg
ttggagagagacattgaccaacagttaacccccgaagcttgggcctctattgggaaaaat
atgcacgcaagccctgaatcgagaaagctgcacggcaagcaggatgaagacgagggggcg
gacgaagacacagaggagaaatgcaccatctgtctgtccatactggaggagggggaggat
gtcaggcgtttgccgtgcatgcacctcttccaccagctgtgcgtggaccagtggctgctc
accaacaagaagtgccccatctgcagagtggacattgaggctcagttgtctgctgagagt
tga
DBGET
integrated database retrieval system
