Syngnathus scovelli (Gulf pipefish): 125971013
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Entry
125971013 CDS
T08785
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125971013
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Others
Others
125971013
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125971013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
AAA_13
Crescentin
DUF5798
Motif
Other DBs
NCBI-GeneID:
125971013
NCBI-ProteinID:
XP_049579795
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MYGSARSVGRGDANHSGGRDAGGGTNQGSGRSPRLPRSPRMGHRRTNSTGGSGGGPGGAG
GKTLSMENIQSLNAAYATSGPMYLSDNEVAVGEHLPKSAGGAVTTMGRQRVTYGSRSSGG
VVAASTPNISTSVPSSTVLPAGLMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENELLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKICVWKEQYRVIQ
DESQHLQMTVQALQDELRIQRDLNQLLQQDPASQGRDLALASEPTEENFRRLHCEHDRQA
KELFLLRKTLEEMEMRIETQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERTRRLAD
AEMHWHHLESLLDQREREITALREELHRRYEGTPESTKTKALQTVIDMKDAKINSMERSL
RDMEEELLMMKSNGLLSCEERQEEMKQMEVYRSHTKFMKSKMDQVKQDLSRKDTELLGLQ
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKEATLNKKSKQIQ
EMSEEKGTLSGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEELESNKKELKELKERLSLLQG
DLSDRETSLLDLKEHASSLASSGLKKDSKLKSLEIALEQKREECLKLDNHLKRAQNATLE
AQANTELAERIKSLKQEVARHKEDSGKAQAEVDRLLEILREMENEKNDKDKKINELEGQM
KDQTKKVASLKHKEQVEKSKNARLMDEAKKREDNMSESSLQVKDSLRQKSERIEELEEAL
RESVQITAEREMVLAQEEAARSLQEKQKHSLNAMHESNLAHLKWSKMEELLGAMEKVKQE
LESMRAKLSSTQQSLCEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLEL
SSSKKKKTQDEVSLLKREKDRLVQQLKQQTQNRMKLMADNYEDEHLKTAPDHTNHRPSPD
QMITPVVALCQNRSKLKLYIAHLTDLCYDRDPSILSHLTPPAHYHRSDPDDWEEELLKMT
AEQLEKELELCEKESGELQEYANCVLQQIADCCPDILEQVVNALEESC
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtagcgcccgctcggtcggcagaggggatgccaaccatagtggaggcagggat
gcaggcgggggcactaatcagggatcgggtcgctcccctcgcctccctcgctccccccgc
atgggccaccgtcgcacaaacagcaccgggggcagcggaggaggtcccggtggcgcggga
ggcaagacgctctcgatggagaacatccagtccctcaacgcagcatatgccacctcggga
ccgatgtacctgagcgacaatgaggtggctgtgggggagcacctccccaaaagtgcaggc
ggggctgtgaccaccatggggcggcagcgggtgacctacggatcaaggagcagcggcggc
gtggtggcagcgagcacacccaacatctccacctcggtgccttcgagcacagtgctgcct
gcgggccttatggcgggcgacgctttggcttttggggaccaccacatggcgtccacggta
ccccattctttaaggcaggcgagggacaacaccatactggaccttcaggcccaactcaaa
gaggttctgcgggaaaacgaattgttgcggcgggaagtggaagtcaaagagagcaagctg
agctcgtccatgaattccatcaaaacattttggagtccagagctgaaaaaggagcgagcg
ctccgcaaagatgaggtgtcgaagatctgtgtgtggaaggaacaataccgtgtgattcaa
gacgaatctcagcacctccagatgactgtgcaggcgctccaggatgagctaaggatccag
cgggatctaaaccagctgctgcagcaagaccccgccagccaaggccgggatctggccctg
gcgtcggaaccgactgaagagaactttaggcggctgcattgtgaacacgacaggcaggcc
aaggaactctttcttcttaggaaaactttggaggagatggagatgagaattgagacgcag
aagcaaactcttggggcccgagatgaatccatcaagaaactattggagatgttgcaaagc
aaaggtccatctgctaaggcatcagaggaggaccaggagcgcaccaggaggctggctgat
gcagagatgcactggcatcacctggaaagtttactagatcagagagagcgagagataact
gcgttgagagaagagctgcatcgcagatatgagggaacaccagagtccaccaaaacaaag
gctttacagacagtcattgacatgaaggatgcaaagatcaactcaatggaacgaagcctg
agggacatggaggaggagctgctcatgatgaagtcaaatgggcttctgagctgtgaggaa
cgacaggaggagatgaagcaaatggaggtctaccgcagccacaccaagttcatgaagagc
aagatggaccaagtgaagcaagacctctcccggaaggacaccgaactgctcggcctgcag
acaaagttggagacgctcactaaccagttttcagacagcaaacagcacattgaggtcctc
aaggagtctctcactgccaaggaacagagggccgccattttacagacagaggtggatgcc
ttgcgtctgcgcttggaagagaaggaggccactttgaataaaaagagcaagcagattcaa
gaaatgtctgaagagaaaggcacgcttagtggagagatccatgacctcaaggacatgctt
gatgtgaaggagcgcaaagtcaacgtgcttcagaaaaagattgagaacttgcaggagcaa
ctgagggacaaggagaagcagatgagcagcctaaaggagagagtcaagtctttgcaggct
gacacgtccaacacagacactgccctcactacgctggaggagtctcttgctgaaaaggaa
cgaatcatagagcgattaaaggagcagcgagatagagacgaccgagagaagactgaagag
ctggagtccaacaagaaggagctgaaagagttgaaggagaggctgagtttactgcaggga
gacctgtcagacagggagacatctctgctggacctgaaagagcacgcgtcatcgctggcc
tcctccggcctgaagaaagactccaaactaaaaagtctggagatcgccctcgaacagaag
agggaggagtgtctcaaactagataaccaccttaagagggctcagaatgcaactcttgaa
gctcaggccaacaccgagctggcagagcgcattaagagcctgaaacaggaagtggcccgc
cacaaagaggattctgggaaagcacaagccgaggtggaccgcctgctggagatcctccga
gaaatggaaaatgagaaaaatgacaaagacaagaagatcaacgagctggaggggcagatg
aaagatcagacaaagaaggtggcatctctgaagcacaaagaacaggtggaaaaaagcaag
aatgcccgactgatggacgaggctaagaagcgtgaggacaacatgtctgagagctcactg
caggtgaaggactctttgcgtcagaagtcggagcgcatcgaggagctggaggaggccttg
agagagagcgtgcagatcaccgccgagcgagagatggtgcttgctcaggaggaggctgcc
aggtccctgcaggagaaacagaagcactcactcaatgcaatgcatgagtccaacctcgcc
cacttaaagtggtctaagatggaggaactgcttggagccatggagaaagtgaagcaggag
ctagaatccatgcgggccaaactctcctccacccagcagtctctgtgtgaaaaggaggct
catctcaccaccctgagagccgaacgcaggaagcatctggaggaagtgctggaaatgaag
caagaggcgctgctggcggccattagtgagaaggatgcaaacattgctctgctggagttg
tcctcctccaagaaaaagaagacccaggatgaagtgtctttgttgaaacgagagaaagat
cgactggtgcaacaactcaagcagcagacacagaaccgcatgaaattgatggcagacaac
tatgaggacgaacatctaaaaacagcccctgaccatacaaaccacaggccctccccagac
cagatgataacccctgttgtagccctgtgccagaaccgcagcaagctcaagctctacata
gcccacttgaccgacctctgctacgaccgcgacccgagcatcctcagccacctcacgccg
cccgcccactaccaccgcagcgacccggacgactgggaggaggagctcctgaagatgacg
gcggaacagttggagaaggagctagagctgtgcgaaaaggaaagcggtgagctgcaggag
tacgccaactgcgtcctgcagcagattgccgactgctgccctgacatcttggagcaggtt
gtcaatgcgctggaggagtcctgctga
DBGET
integrated database retrieval system
