Syngnathus scovelli (Gulf pipefish): 125974238
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Entry
125974238 CDS
T08785
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125974238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125974238
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125974238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
125974238
NCBI-ProteinID:
XP_049585188
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MVDARLTPLAAMGLERGALIHDGLRLHGGVVYPGIRTLQTEKTREATILPLGYNRDVLPE
LVYKPDGPLDSRKATNGYLGLYKGIPPNLHKPVLIPGAEALGLERRLAPGEKAPEMSLGS
TGSSYLRLPWLNPYPEASMYPFMDSSKYAALNMYKASLLSQPNPYLPQHLAYPSLCAPQG
GNVNHVAVTSAAERLYYMPTYPPPTMSSPLVAPQMRIPPVSVAPTSLVHCQDKGLGVAPP
FVQQLHQPSPHPQHHPSAIDRERSPNRSSRPSRPPSRSGGGVSNNTGSTSTSAASVGNNS
LPTDSSPHASSRLSQTLIDNSLDLQRPVARMGQPPVSSASISSSSATQSVSHMLSVGSMA
PEQASPARPRPRDGAPGAERRPSRSPSKSNFDRTAHQPQATKESAEKPLDLSGRILEFGL
PNGFPIKMDTMAPGARYGLPPSGELLKENLSLSPSSHPHPVVNSTSVKVSERPEMISTLH
SSWVVPSRSPSQTQHAPGLSASPRSNADLGSSQAKGSSPSVIKHKNLERVLPQPRSSSCP
RISESNSVSSDSALITSRGLSPKSNGDWAKHSPHQSEHVSVMGHHREGVEKSSQNAKRAE
SIPEAPSYKRPILENGHPAAPLYLPQSDAYLTHSLAYANRYLHYPIHDSMALHPLPIAGK
GPVYPHPVLLGSNSLYPSHLAAKPPLPYHNLPPATGGEYLAYNSQEMSHPLMQPLSDKLS
ERGDGALKPRGHEKPRGSFEEREKNTSKEVREGSHIKSDKEAIAQGQSGSQTKTSSPSVA
HREKIECIDLVHSDTDAESTPAVQKQPSGESSAFDQNERYHSNQNTTRVEYEPKFHLSHP
YPILSGHSPTQKPHPTDRQQETTYGKPKAVQDAGCPAATSSTPPNNPGKLCRGEEEDSSE
EQCPSPDLADDDQSTLRCARTSGERSSGKDKGARDSRAPHFTPTCAVVPKEANQDALTCR
DTENEDSVVDLGESQGEGDDEDDEDCQNPKGSRRSSLAKRIANSSGYVGDRFKCVTTELY
ADSSKLSREQRALQMEVISREGSNISQPAANWERAMMRFSELELKEKEGGGCGGGSGGSV
CVSAPTAGRELADSQRRERALELSQYATRHGEREGVLLAYPNNRVPVLQRCGTQRESASL
SDSARRLGLESEGGHPALAARESTEEALGHDFGAGGKRLRVLKVEQDSEQEEEERMFHPQ
KRARMSADEHEQTSADDDAEEDDDDEVRKLKVCIELKGLRLSKPAQGGASPDRPQIKQEQ
PWPRLLGPAQTQRERDERALAQRADINRKWACERLLNGVAAPPLHPGGQLKDRVHPPGPF
SGDRGLKEPRRGPPSPGPEPPLGGAPPLKLRRHSDTDKPKGKRPCKTKHTSLRERERRKE
AAPNSPDQHFPADLGTAEDDKLSEQREAPRKRAASPNHYPCSPVKPCSPAALCPPPPQPQ
ANGRAGGVPPEVIGAHRMPAAAAADTPVVRPIPPEARRLIVNKNAGETLLQRAARLGYEE
VVLYCLENRVCEVNHRDYAGYCALHEACARGWLSIVQHLLDYGADINCSAQDGTRPIHDA
VENDHLDVVRVLLSYGADPTLATYSGRGLLKMTHSDIMERFLTDYFADLQGRADDDPGVY
WEFYGSSVCESAEEGGAYDVLADPPGPDEDDEDDKREVFEFEFSDRPLLPCYNIQVSVSH
GPRNWLLLSDVLRRLRMSARGFRQAFPHMEVVTVSEAEFYRQASLSQLFSCPEELEGFQP
DSKELLDLVEDSAELAALLGSTLECLDDRWEQARDKLKDRIKAAGQVGLILNPAHKH
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacacccctggcggcgatggggctggagcgaggcgccctgatc
cacgatggtcttcgcctccacggcggcgttgtgtatccaggaattcgaacgctgcagaca
gagaagactagagaggcgaccattctcccattgggttacaatcgggacgtgctacccgag
cttgtctacaaaccggatgggcctctggacagtcgtaaagccactaatggttacctgggc
ctctataagggcatcccgcctaatctccacaagccggtgctaattcctggagcggaagct
ttaggcttggaacggcggctggcacctggggaaaaagcacctgaaatgagcttagggagc
actggcagcagctaccttcgtctgccgtggctcaacccttacccagaagcgagcatgtat
ccctttatggactcgtccaagtatgccgctctgaacatgtataaagcttcgttgctcagc
caacccaacccctacctcccccagcatctggcctacccttctctttgtgcaccccaaggt
ggaaatgtcaaccatgtcgcagtcacctctgctgctgaaaggctctactatatgcccacg
tatccacctcctactatgtcctcccccctggtggctccccaaatgaggatcccgcccgtc
tcagtagcccccacctcacttgtgcactgccaagacaaggggctgggtgtcgccccgcca
tttgtacagcagctccaccaaccttccccgcatcctcagcatcatccgtctgctatcgac
agggagcgatcacccaacaggagcagtcgaccgagccgacccccttccaggtctggcggc
ggtgtcagcaataacaccggtagtacaagcacgagtgccgccagtgttggcaataatagc
ctgcctactgactcctcacctcacgcgtcctctcgcctttcccaaaccctcattgacaat
tcactggatttacaaaggccagttgcaaggatgggacaaccgcccgtttcctcggcttcg
atatcttcgtcgtctgccacgcagtccgtttctcatatgttgtctgtcggcagcatggcg
cctgaacaggcctcccctgccaggccgcggccaagggacggggcgccaggtgctgaaagg
agacccagcaggtcaccctcaaagtccaattttgacagaactgctcaccaaccacaagca
accaaagaatcagcagagaagccgttggatttgtctggtcgaatactggagtttggactt
cctaatggtttccccattaaaatggacactatggctccaggtgcacgttatggacttccg
cctagtggagaactcctaaaagagaacctatccctctcgccctcctctcaccctcacccc
gtggtaaacagcacttctgttaaggtctcggagagaccagagatgatcagcactttacac
tcgtcctgggttgtacccagccggtctccgtctcaaacccagcacgccccgggcttatcc
gcatctcccagatcgaatgcagatctgggatcttcgcaagccaaaggctcctccccctct
gtcatcaaacacaagaatctggaaagagtgctccctcagccacgtagctcgtcctgtccg
aggataagtgagtccaactctgtttcgtcggattccgctctcatcacatcaaggggtctc
tcccccaaatcaaatggtgattgggccaaacacagcccccatcaatcagaacacgtatca
gtcatgggccaccacagagaaggagtggagaagtcctcccagaatgctaagcgagcagaa
agtattccagaggcgccatcctacaaaaggcccattttggagaacggtcacccagcggcc
cccctttaccttcctcaaagtgacgcttacctaacccacagtctggcctacgccaataga
tacctgcactaccccatccatgacagcatggcacttcaccccctgccaattgcagggaaa
ggtccagtctaccctcacccggtattgctgggcagcaatagcctttatccatcccacttg
gcagccaaaccccctttaccctaccacaacctaccgccggctacaggaggggaatacctc
gcttataactcgcaggagatgtcgcacccgctaatgcagcctctctccgataagctgtca
gaaagaggcgacggcgcactgaaaccgcggggacacgagaaacccaggggttcttttgaa
gagagagagaagaacaccagcaaagaggtgagagaagggagccacatcaagtcagataaa
gaagcaatagcacaagggcaaagtggcagtcaaactaaaacatcgtctccctctgtcgcg
caccgagaaaagattgaatgcattgaccttgtccactcggacaccgacgcagagtcgact
ccggccgtccagaaacaaccctctggcgaatcctcagctttcgaccaaaatgaacgttac
catagcaaccaaaacacaacaagagtggagtatgagccaaaatttcatctttcccatcct
taccctatcctctccggacacagcccaacacaaaagccccatcctacagacagacagcag
gaaactacctatggaaagccaaaggctgttcaggacgcaggctgtcctgcagcgacctcc
agcacacccccaaataatcccggaaagctctgccgaggagaagaggaagactcctcggaa
gagcagtgtcccagcccggacctcgcagacgacgaccagagtaccttgcgttgcgcccgt
acgtccggcgaacgcagctctggcaaggacaaaggggcacgggacagcagagctcctcac
ttcactccaacgtgcgccgttgtgcccaaagaggccaaccaggacgcgttgacgtgtaga
gacacggaaaacgaagacagcgttgtggacctcggggagtctcaaggagagggtgacgac
gaggacgacgaagattgccagaaccccaaaggctctcgccgttccagtctggccaagaga
attgccaactcgtcgggctatgtcggcgaccgctttaaatgcgtcaccacggagctgtac
gctgactccagcaaactgagccgcgagcagagagcgctgcagatggaagtcatatcacga
gaggggagtaatataagtcaacctgcagctaactgggagcgggcgatgatgcggttctcc
gagctggagctgaaggagaaggagggcggcggctgtggtggcggcagcggcggcagtgtg
tgcgtgtctgccccgacagcgggacgagagctggccgacagccagcgcagagagcgagcg
ctggaactcagccaatacgccacccggcatggggagagggagggtgtcctgctggcgtac
cccaataatcgtgtcccagtccttcagaggtgtggtacccagagagagtccgccagtctg
agcgacagcgctcgcaggctgggcttggagtccgaagggggtcaccctgccttggcggcg
agagagtctaccgaggaggctctcggtcatgactttggcgccggtggaaagcgcctgcgc
gttctcaaggtggagcaggattctgagcaggaggaagaagagaggatgttccaccctcag
aaaagagccaggatgtctgctgacgagcacgagcagaccagcgcagacgacgacgcagaa
gaagacgatgacgacgaggtgcgcaagctcaaagtctgcatcgagctgaaagggctgcgg
cttagcaagcccgcccaggggggcgcctctcccgaccgcccccagatcaaacaagagcag
ccttggccccgcttgctcggcccggcgcagacccagcgagagcgtgacgagcgagcgctg
gcgcagagagccgacatcaacaggaagtgggcctgcgaaagactgctcaacggagtcgct
gcacctccccttcaccccggcggccagctgaaggacagagtgcacccgccgggccccttc
tcaggtgaccgtggcctcaaggagcctcggcgcggccctccctctccgggcccggagccc
ccgctgggaggcgcccctcccctcaagctgcgtcgtcatagcgacacggacaagcccaag
ggcaagcggccgtgcaagaccaaacacaccagcctgcgagagcgtgagaggagaaaagag
gccgcgcctaacagccctgaccagcatttcccggctgatctgggaacagctgaggacgac
aagctgagtgagcagcgagaggctccgaggaagcgagctgcctctcctaatcattatccc
tgctctccagtcaagccctgctcccccgccgcgctctgtccgcccccgccgcaaccccag
gccaacggcagagcgggcggcgtcccgccagaggtcatcggggcgcaccggatgcccgcc
gccgccgccgccgacaccccggtggtgcggcccatcccgcccgaagcccgacggctgatt
gtgaacaagaatgccggcgagacgctcctccagagagcagcgcgtctgggctacgaggag
gtggtgctctactgcctggagaaccgagtgtgcgaggtgaatcaccgagactacgccggc
tactgcgccctccacgaggcctgcgcccgcggctggctcagcatcgtccagcacctgctg
gactacggggccgacatcaactgtagcgcgcaggacggcaccaggcccattcatgacgcg
gtggaaaacgatcaccttgatgtggtgcgcgtcctgctgtcctacggggccgaccccacc
ttggcaacgtattctggccgtggcctcctcaaaatgacccacagtgacatcatggagcgc
tttctcaccgattattttgctgaccttcagggccgcgctgatgacgaccccggagtttat
tgggaattctacggcagctctgtgtgtgagtctgccgaggagggcggagcttacgacgtc
ttggccgacccacccggccctgacgaggacgacgaggacgacaagagggaggtgtttgag
tttgagttctccgaccggcccttgctgccgtgctacaacatccaggtgtccgtctctcat
gggcctagaaactggctactcctgtctgatgtgctccgccgtttgcgcatgtcggcccgt
ggcttccggcaggccttcccccacatggaggtggtgacggtgtccgaggccgagttctac
cggcaggcctcgctgtctcagctcttctcctgtcctgaggagctggagggcttccagcca
gacagcaaggaactgctggacctggtggaggacagtgccgaactagctgccctgctgggc
tccacgctggagtgcttggacgaccgctgggagcaggccagggacaaactgaaggacagg
atcaaggcggctggccaagtgggcctcatccttaacccggctcacaagcactga
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integrated database retrieval system
