Syngnathus scovelli (Gulf pipefish): 125982285
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Entry
125982285 CDS
T08785
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125982285
03041 Spliceosome [BR:
sscv03041
]
125982285
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125982285
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
125982285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125982285
NCBI-ProteinID:
XP_049598688
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MDAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKSEYKV
AGLYVVDSIVRQSRHQFGADKDVFGPRFTKNIVATFENLCLCPLEDRSKLVRVLNLWQKN
GVFKSNVIQPLLDMAAGATSGDGPCPEDPGSSPLTPTKDHVVNSASAPLQNQDPFTAVAQ
LFQSTQNQQLQQMLQNFQQQHQQQPVQAEPSPQPPPAPSVAPVFNTALPHPSQAAQQKAA
FDKTLLDRFDYDDEPEAPEDKDDGPQSSFMQQPPAFQPPMMNMTQDFSQQGPLPPNGQIP
AYGLMPGQGFQGMTPQMGQVAPGQPFPGFPGGYPPPHSTQQQQDSTVNAERSSMRDGRHG
HTSRSGSRSPKRRRSRSNSRTRRPRHRRSRSRDRRHHSPRSRSQERRERERERERRQKGL
PPLKSETLSICSTTLWVGQLDKRTQQQDVANLLEEFGQIESINMIPPRGCAYIVMVHRQD
AFRALQKLGRGSFKVNQKAIKIAWALNKGIKADLKQFWDVELGVTYVPWSKVREEQLEEL
KEGGILDGDTLAPDWITARKALENPQVPTHNGGAESQQPEDAHLMAPHPPTQVPPMLGMS
SVPPPGFPANMSMPPPSFPPGMPPPPFMRPGFNPMQMPPGFPPPGPMPLSMPPPPPSKGD
DMLSRKHDEVPDAPHFFNNQMGAMCNQAGAPPAGGIQPPTGGLLGARPGMIPLQRPPGPP
LRFPPPPVPPQMIPRGPHPPHMRHDAPPPKGAFGMPHSMRPPFPPHGPPPQGPPHQGLPP
QGPPPQGPPLPPFIRPGAPREDEDSRPFRGERPGYMEAEPDRERGFGGAARRPFGGDRPD
TRDRLDGSGWNRDWRDRENGSKEAQEKGKESERPKRRERASRWDRDDRLADLEKMDNLRT
FDAVATETAQRIQKTAESAPPAAESSKAAAS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgttaacgccttcaaccaggagttgttctccttgatggactctaagccgccg
atttctcgcgccaagatgatctctatcaccaagtcggccatcaaggctatgaaactctac
aagcacgtggtacagattgtggagaagttcattaaaaagtgtaagtccgagtacaaagtg
gcgggcctgtatgtggtggactccatcgtccgccagtcacggcatcagtttggtgcagac
aaggatgtttttggaccccgcttcaccaaaaacattgtggccaccttcgagaacctttgc
ctttgccccctggaggacagaagtaagctggtacgtgtgctgaacctatggcagaagaac
ggcgtgttcaagagcaacgttattcaacccctcctggacatggccgccggcgccaccagc
ggcgacgggccttgccccgaggatccgggttcctcccctttgaccccgaccaaagaccac
gtggtgaactctgcctcggcaccactgcaaaatcaagaccccttcaccgctgtggcgcag
ctcttccagtccacgcagaatcaacagctgcagcagatgcttcagaacttccagcagcag
catcagcagcagcccgtccaagcggaacccagcccccagcctccacccgccccgagtgtc
gccccggttttcaacaccgctctgccgcatcctagccaggccgcccagcagaaagcggcg
ttcgacaagacgttgttggatcgttttgactacgacgacgagccggaagccccagaggac
aaggatgacggcccgcagtcctccttcatgcagcagcctccagccttccagccgcccatg
atgaacatgactcaggacttctcgcagcagggtcctctaccccctaatggccagatcccg
gcttacggtctaatgccaggacaaggcttccagggaatgacacctcagatgggccaggtt
gctccgggtcagcccttccccggattccctggaggttatccccctcctcactcgacccag
caacagcaggattcgacagtcaatgccgagcgttcctccatgagggacggcagacatggt
cacacgtcacgttcaggctccaggtccccgaagagaaggcgatcgcggtccaattcccgc
acacgccgcccccgtcaccggcgctcgcgttcccgcgaccgacgccaccattccccgcgc
tcacgctcgcaggaacgccgggaaagggaacgggagcgggagcggcgacaaaaaggtctc
ccgccgctcaaaagcgagacgctaagcatctgcagtacgactttatgggtgggccagctg
gacaagaggactcagcagcaggatgtggccaacttgctggaggagttcggacagatcgag
tccataaacatgatccctccgcggggctgcgcctacatcgtcatggtccacaggcaggat
gccttcagggctctgcagaagctcggtcgaggctccttcaaagtcaaccaaaaagcaatc
aagattgcgtgggctctgaacaaaggcatcaaggctgatttgaagcagttctgggacgtg
gagctgggtgtcacctacgtgccttggtccaaagtcagggaggagcagcttgaggagctc
aaggaaggaggaatcctggatggggacacgttagcgccagactggattactgccaggaaa
gctctggagaacccacaggtgcccacccacaatggtggtgctgagtcacagcagcccgag
gacgcccacttgatggctcctcatcctcctacacaggttccaccgatgctcggcatgagc
tcggtgccgccacccggcttccccgccaacatgagcatgccgccgccttccttcccgcct
ggcatgcccccgccaccgttcatgagaccaggcttcaaccccatgcagatgcctccaggt
ttccccccaccgggtcccatgcctctctccatgccgccgccgccaccctccaaaggggat
gacatgctcagcagaaaacacgatgaggtcccggacgctccccatttcttcaacaaccag
atgggcgccatgtgtaaccaggcaggcgcacccccagctggcggcatccagcccccgaca
ggcggtctcctgggggcccggcccggtatgatcccgcttcaacgcccaccgggccctcct
ctgcgcttcccgccaccgcccgtcccacctcaaatgattcccagggggccccacccgccc
cacatgcgccacgatgcccctccgcctaaaggagccttcgggatgccccacagcatgaga
ccacccttcccgcctcacggtccgccccctcaaggtcccccgcatcaaggtctgcctcct
cagggtccaccccctcaaggtccccctttgcccccgttcatcagacccggagccccgcgt
gaggacgaggacagccgcccttttcggggcgagcgcccgggctatatggaggcggagcca
gacagggagcgagggtttggcggcgcggcgaggcgcccgtttggcggagaccgcccggac
acgagggacagactggatggtagtggatggaatagagactggcgagatcgggagaacggc
agcaaagaggcccaggaaaaaggcaaagaaagcgagcggcccaagcggcgtgagagggcc
agccggtgggaccgcgacgaccgcttggccgacctggagaaaatggacaatctccggacc
tttgacgcagttgctacggaaacagcccaacgaatccaaaagactgccgagtcggcgcct
cctgctgccgagtcgtcaaaggcggcggcgtcgtag
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