Syngnathus scovelli (Gulf pipefish): 125986238
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Entry
125986238 CDS
T08785
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2a isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04260
Cardiac muscle contraction
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125986238
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125986238
04261 Adrenergic signaling in cardiomyocytes
125986238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125986238
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125986238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
125986238
NCBI-ProteinID:
XP_049605768
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MKLLNRQVFSQPDDEGQSWTCFSKALFSLAPTTLCFVTCRAHAPQHNPCGILTLIKPNII
QDLAWAAHKTTHSGGEGLTNLAFSSNFFLSLMLSESNQTNGNFRRPLLPITVTIAASCRA
DNDFLISRVSPTRAPGYTGSADSYTSRPSDSDVSLEEDKEAVRREAERQAQAQLDKAKTK
PVAFAVRTNVNYSPCHEDDVPVPGMALSFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFI
PSPVKLENMRVLQELRAKQGKFHSSKLGANSSSSLGEVVSNSRKSTPPSSAVDLDATGLD
ADDNEPPVILRSPRCGGANTLTSPLAKEKRMPFFKKTEHIPPYDVVPSMRPVVLVGPSLK
GYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNHPSKHAIIERSNTRSNLA
EVQRERERIFELARTLQLVILDADTINHPSQLGKTSLAPIIVYVKITSPKVLQRLIKSRG
KSQAKHLNVQMVAADKLAQCPPEMFDIILDENQLEDACEHMADYLEAYWKSTHPNGCDAP
EPSLTKTPAAPLPSSSGVQGGGAEHRAEKAIVERKGSREDHHYHHQNQDQEQADGEEDAA
IEEERPPRTESSRRGAPHAQHRSSSTRTENHNHHRHHHHHHHHHRSRGLGRQETLDSESP
ENRENKDDAYVEPHTQLLPQHHQQLQHEDTNQEEMEEEEEEDLREPQQGHRDHNHHHHHH
HHHHHRTKEREQDHNERNKQRSHHHQQQQQRPARDHHHYEREPKKRGDAGEWAQDSYIPQ
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctgaatcggcaagtctttagtcagcctgatgatgaaggtcaaagctggacg
tgcttctcgaaagcattgtttagtctggcgccgacgactctttgctttgtcacgtgccga
gcacacgctccacaacataatccttgcggaatcctaaccctgatcaaacccaatataatc
caggatttagcctgggccgcccataaaacaactcactcggggggagaaggacttacaaat
ttggcttttagttctaatttctttttatcattaatgttgagcgaatcaaatcaaacaaac
ggaaactttcggcggcctctgcttccgataaccgtgaccatcgccgcgtcgtgtcgcgca
gataatgacttcctgatatctcgggtctcaccaacacgtgctccaggctatacaggttcg
gccgattcctacaccagccgtccgtcggactctgatgtgtctctggaggaggacaaggag
gcagtgcgcagagaggcagagaggcaagctcaggcgcagctcgacaaggccaagacaaaa
ccggttgcgttcgccgtccgcacaaacgtcaactacagcccctgtcacgaggacgatgtc
cccgtccccggcatggcgctttcgttcgaggccaaagacttcctccacgtcaaagagaaa
ttcaacaacgactggtggataggccgtctggtgaaggaaggctgcgaaattggtttcatt
cccagtccggtcaagctggaaaacatgcgagtcctccaagagctgagagccaaacagggc
aagttccattccagcaaactgggagcaaactcctcatcaagtttaggtgaagtggtttcg
aactcccgcaagtcaactcctccttcgtctgccgttgacttagacgccacaggcttagac
gcggacgacaacgagccgccggtcatcctgcgctcccctcgatgcggcggtgctaacact
ctcacgtccccattagcaaaagagaaacgaatgcccttttttaagaagacggaacacatt
cctccatatgatgttgtgccttccatgcggcccgtggttctggttggaccgtcgctgaag
ggctacgaggtgaccgacatgatgcaaaaagcactgtttgactttttgaagcaccgattt
gagggacgaatctccatcactcgcgtcacggccgacatctcgctcgccaagcgctccgtc
ctgaaccatcccagcaagcacgccatcatcgagcgctccaacacgcgctccaacttggct
gaggtccagagagagagagagcgcatctttgagctggcgcggacactgcagctggttatc
ctggacgccgacaccatcaaccacccgtcgcagctgggcaagacgtcgctggcccccatc
attgtctacgtcaagatcacctcccccaaggtgctgcagagactgatcaagtcacgaggc
aagtctcaagccaaacacctcaacgtccagatggtggcggccgacaagctagctcagtgc
ccgcctgagatgtttgacatcatcctggacgagaaccagctggaggatgcgtgcgagcac
atggctgactacctggaggcctattggaagagcacgcacccgaatggctgtgacgccccg
gagccgtcgctgaccaagacgcccgccgcccccttgccctcctcgtccggcgtgcagggt
ggcggtgcagagcatcgagcagaaaaggcaatagtggagcggaaaggctccagagaggac
catcactaccatcatcagaaccaggaccaggagcaggccgacggcgaggaggacgctgcc
atcgaggaggagcgccccccgaggaccgagtcgtccaggagaggagcgcctcatgcccag
caccgctcttcttccaccaggaccgagaaccacaaccaccaccgacatcaccatcaccac
catcaccaccaccgaagcaggggcctcggccggcaagagacgctggactctgagagcccc
gagaaccgggagaacaaagacgacgcttacgtggagcctcacactcagctcctccctcag
caccaccaacagctgcagcatgaggacaccaaccaggaagaaatggaggaggaggaggag
gaggacttaagggagcctcaacaaggccaccgggaccacaaccaccaccaccaccatcat
catcaccaccaccatcgcaccaaggaacgcgagcaggaccacaatgaacgtaacaagcag
cgcagtcaccaccatcaacaacaacaacaaaggccggcgcgggaccaccaccactacgaa
cgagagcccaaaaagaggggtgacgcgggggaatgggcccaagactcgtacatcccccag
tag
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