KEGG   Syngnathus scovelli (Gulf pipefish): 125989081
Entry
125989081         CDS       T08785                                 
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sscv01009]
    125989081
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125989081
Enzymes [BR:sscv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125989081
Protein phosphatases and associated proteins [BR:sscv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125989081
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125989081
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN DUF1804 PHD_2 PHD_5
Other DBs
NCBI-GeneID: 125989081
NCBI-ProteinID: XP_049611025
LinkDB
Position
Unknown
AA seq 1535 aa
MMSQPRPGEFKPPPECPVFEPSWEEFADPYAFINKIRPIAEKTGICKVRPPQGWHPPFAC
DVDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCSLKIPHVERKILDLYQLNKL
VAEEGGFDIVCRDRRWTKIAMQMGFAPGKAVGSHLRGHYEKTLYPYNLFQSGANLLTPEA
ASKLMRLEADPELEKCVQKPVHPEESAESMAQVDTKEHKLPEPLQRQPIQTPNSCPNARR
GKRMKYESVCVKTEPGEPGENRPNLRRRMGSFVAKPEPEKEIPIQVKLEPVEIKEPVIEE
DKFKQRYKKYLPPLPPNPVDLVVCLVCGSGGDEDRLLLCDGCDDSYHTFCLIPPLTDVPR
GDWRCPKCLAQECSKPHEAFGFEQAYRDYSLRAFGQMADAFKSDYFNMPVHMVPTELVEK
EFWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNMAMMN
PSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAE
QLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVVTFPRAYHS
GFNQGFNFAEAVNFCTVDWMSLGRQCVNHYRTLHRYNVFSHDEMVCNMAAKAETLDVVLA
SAVHKDMAVMIMEEQELREKVSKMGLVQWQEAKYDHLQDDERQCAKCRTTCYLSAITCPC
SPGVLVCLHHITDLCSCPVTNYTLNYRYTLEELLPMMNASKQRAEQYDAWASRVSETLEA
KLEKKKGLPVFRTLLAESESEGFPENDLLRRLRMVTQDAERCSSVAQQLLNGKRQTRYQC
GVGKSRSQLTVEELSSFVRQLYNLSCSLTQAPLLKELLNRIEDFQQHSEKVLADDAPSVA
EIQSLLNVSFDFDVDLPELPRLRERLEQARWLEGVEQASVQPASLTLETMRRLIDQGVGL
APHSSVEKAMAQLQELLTVSEHWEDKASSLLKARPPHSIETLSAAAEEVSGISSHLPNCL
LLKDTIRKALEWLQEAEELQANDRVLMLDDLSDMVLRGQAIQVHLEPLDRLETLMAEVQE
WKESAASIFLQKDSARTLLEALCPRCEVGNEDSPKRKAKKGKESSKSNKKKTLRLNTVSD
VEKALSEAKDSASVNATLEALRVREMEAFCHLRVANESKLLPTADCTDLKVCVCQKALMG
AMLQCELCRDAFHSVCVRDQSDLSETPPWLCPQCQRSRKPPLNKVQPLLASLRRIRVRLP
EGDALHHLVERTVNWQHRAQQILQSCHLTELENGAQTPPILTRCASDPSDTYTNSQAPFL
TPEWNKTNHAQTVFYTEQRCIPLQGLNQDLEELMVEGLLLQVSLPEVQTLHHVLLDRATS
QHTVSPARDDTSKHVPFHSQGKKLNQDTNGRDSLMVPEKKAKRHLAVNGERRARDRKHSH
KRQKMNQKELQRRPTSNSSSPRSDISQSDESDEDMAVCPAERCQLPEGNEVDWVQCDGSC
NQWFHQVCVGVTTEMAEKEDYICVQCTLSNSCMTE
NT seq 4608 nt   +upstreamnt  +downstreamnt
atgatgagccagccgcgaccgggcgagttcaagccgcctccggagtgcccggtgttcgag
cccagttgggaagaatttgcagacccatacgctttcatcaataagatccgtcccatcgcc
gagaaaacgggcatctgcaaagtccgtccgcctcagggttggcaccctccatttgcttgc
gatgttgacagacttcattttgttcctcggatccagaggctcaatgaactggaggctcag
acaagagttaaactcaactttttggaccagattgccaaattctgggatttgcagggatgt
tccctaaagattccccacgtggagaggaagattttggatttgtaccagctaaacaagtta
gtagcagaggaaggcggcttcgacattgtctgtcgggacagacgttggaccaagattgcc
atgcagatgggctttgcccctgggaaagctgttggctcacacttgcgagggcattatgag
aaaacactctacccctacaatctctttcaaagtggcgcaaatctgttgacgccagaggca
gcttccaaactgatgcgtttggaggctgatcctgagctcgaaaagtgtgttcaaaagcct
gtccatcccgaggaaagtgccgagagtatggcacaggttgacaccaaagagcacaaactg
cccgagccacttcaaaggcagcccatccagacgcccaattcttgccctaatgctcgaaga
ggaaaacgcatgaagtatgagtctgtatgtgtgaagactgaaccaggcgagccaggcgag
aatcgtccgaacttgaggaggaggatgggctcttttgttgccaagccggaaccagaaaag
gagattcccattcaagtaaaactggaaccagttgaaatcaaggaaccagttattgaggag
gacaaattcaagcaacgctacaaaaaatacctcccacctcttcctccgaatccagtggat
ctggtggtgtgtctggtttgtggcagtgggggagacgaagaccgcttgttactatgtgac
ggttgtgacgacagctaccatactttttgcctcatcccccctctgaccgacgtccccaga
ggagattggaggtgccccaagtgtctggctcaggaatgtagcaagcctcatgaagcgttt
ggctttgagcaagcttacagggactactccctacgggcttttgggcaaatggcagatgca
ttcaaatccgattattttaacatgccagttcatatggtacctacagagttagtggagaaa
gaattctggcgcttggtgggagccatcgaggaggacgttactgtcgaatatggagctgat
attgcgtcaaaggagtttgggagcggattccccattcccaatgggaaatttaaggtttct
cctgctgatgagaaatacctcaagtgtgggtggaacctcaacaacatggcaatgatgaat
ccatccgtcctcacacacgtgacagcggacatctgtggaatgacattgccgtggctttac
gttggcatgtgcttctcctccttttgttggcacattgaggaccactggagctactccatc
aactacctccactggggggagcccaaaacctggtacggagcgcccgggtttgctgcagag
cagttagaagacgtgatgaagaaactagccccagaactgtttgagtctcagcctgacctc
ttgcaccagctggtcaccatcatgaatcctaataccctgatggcccacggtgtcccgatt
tatagaacgaatcagtgcgctggagaatttgtcgtcacgtttcccagagcctaccatagt
ggcttcaatcaaggcttcaactttgccgaggcagtcaacttctgcacggttgattggatg
tctctcggtaggcaatgtgtcaatcactatcgcacgctacaccggtacaatgtcttctcc
cacgacgagatggtgtgcaacatggcagcaaaagcagagaccctcgatgtggttctagca
tctgctgtccataaagacatggccgtcatgatcatggaagagcaggaattaagggaaaaa
gtgtcaaaaatgggcttagtgcagtggcaggaggcaaaatacgatcatctgcaggatgac
gagcgacagtgcgccaagtgccggaccacctgttacctgtctgccatcacctgtccctgt
agcccaggagtactggtctgtctgcatcacatcactgacctgtgctcctgcccggttacc
aactacacactgaattacagatacacactggaggaactgctgcccatgatgaatgcctcg
aagcagcgtgccgaacagtatgatgcgtgggcctctcgtgtgtcagagactctggaagct
aaactggaaaagaagaaaggcttgccagtttttcgcactctccttgctgaatctgagtct
gaaggcttccctgaaaacgaccttctgcgtcggttgcgtatggtcacccaagatgcagag
aggtgctcctcagtggcacagcagctgttgaatgggaaaaggcagaccaggtatcaatgt
ggcgtcgggaaatcccgcagccagttgaccgtggaggagcttagttcgtttgtgaggcag
ctgtataacctctcctgcagcctcactcaagcccccttgttgaaggaactcttgaatcgc
attgaagacttccagcagcatagtgagaaggtcctggccgatgatgctcccagcgtggct
gagatccagagcctgttaaatgtcagctttgactttgacgtggacctgcctgagctgccg
cgcttgagggagcgactagaacaggcccgctggctggagggagtggagcaagccagcgtc
cagcccgcaagcctgactttggaaaccatgcgaagactcatcgaccaaggcgtgggcttg
gcacctcactcgtccgtggagaaagccatggcacagcttcaggagcttttgacggtgtcg
gagcactgggaggacaaggcgagcagtcttctgaaagccagaccacctcactccattgag
accctgagtgctgcagccgaggaggtttctggcatctcctctcacctccctaactgcctc
cttctgaaagacaccatccgaaaagctctagagtggcttcaggaagccgaggagcttcag
gctaatgaccgcgtacttatgttggacgacctatctgacatggtgctacgaggccaagcc
attcaagtccatctggagcccttagacagacttgagactttaatggcagaagtacaagag
tggaaagaatctgctgcttccattttccttcaaaaagactcagcccgtaccctgcttgag
gctttgtgtccaagatgtgaggttggaaatgaagattctcccaagaggaaggccaaaaaa
gggaaggaatcatcgaagagtaacaagaagaaaactctcaggctcaacactgtcagtgat
gtggagaaagcgctttcagaggccaaagattctgcctctgtcaatgcgactctggaggcg
ctgcgggtcagggagatggaggccttctgtcatctgagagtagcaaacgagtcaaagctc
ctccccactgccgactgcaccgacttgaaagtgtgcgtctgtcagaaggcgctgatggga
gcgatgctgcagtgtgaactctgcagggacgcgttccacagcgtttgtgtcagggaccaa
tcagatctcagcgagacaccgccgtggctgtgtccccagtgccagagatccagaaaaccg
ccactgaacaaagttcagcctctgctcgcatccctgaggcgaatcagggttcgactgccc
gagggggacgcactgcaccacctggttgagaggacagttaactggcaacatcgcgcacag
cagattctacagtcttgccatttgacagaactggaaaatggagcccaaacgcccccaatt
ctgacccgttgtgcatcagacccctccgacacttacactaactctcaggccccgttttta
accccagagtggaacaagacaaatcatgctcagactgtgttttataccgagcagagatgc
attccgctgcaaggcttgaatcaggatctggaggagctgatggtggaaggtctcctcctg
caggtatcactgccagaagtccagaccctacaccatgttttattggacagagccacgagc
cagcacacagtgtctccagcacgggacgacaccagcaaacatgttccgtttcactctcag
ggaaaaaaacttaaccaggatactaatgggagggactctctaatggtgccagagaagaaa
gcaaaaaggcatttggctgtaaacggagagcgcagagcaagggacagaaagcattctcac
aaaagacagaagatgaaccaaaaggaattacagcgcaggccaacctccaactcgtcctca
ccgcgttccgatatctcacagtctgacgagtctgatgaggacatggccgtgtgccccgcc
gagagatgccagcttcctgagggaaatgaggtggactgggtccagtgcgacggcagctgc
aaccagtggtttcaccaagtatgcgttggtgttacgactgaaatggcggagaaggaggac
tacatttgtgtccaatgcacactgagcaactcgtgcatgacagaataa

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