Syngnathus scovelli (Gulf pipefish): 125994539
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Entry
125994539 CDS
T08785
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125994539
03037 Cilium and associated proteins [BR:
sscv03037
]
125994539
Transporters [BR:
sscv02000
]
Other transporters
Pores ion channels [TC:
1
]
125994539
Cilium and associated proteins [BR:
sscv03037
]
Other cilia and associated proteins
Stereociliary proteins
125994539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
125994539
NCBI-ProteinID:
XP_049619840
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MPRNKLITTEDDIHIGLDTGDEDQICTIPEEYERKKTAKKKQDSKREGKKGNRKKKKHAA
ETQEELMDRPERKEKGMRKKGNNDKNNTAKEIEREDKKKMAREKNLKNKQREKVPMESGA
EDEHFKRKHKHDSAPNEERKENVRKREKEKKQEVKMKKHTKVIETSSEQETSEEEDKEDS
NDEELRPESLTAEELQELKEEVDERKKLIQGLRGKPWSMKKKLLTLRESQEFVENYEGAL
GKGKGRRLYAYKVMMTKKWMKFQRDFENFRTACIPWEMKIKEIESHFGSSVASYFIFLRW
MYGINMILFGLTFGLVMVPEALMGRPYGSISRKTVPRAEEGSAMDFAVLWDFGGYAQYSV
LFYGYYNDQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNSNETGVGDDNSFNFS
WKMFTSWDYLIGNAETADNKFASITTSFKEAILEEQESHKDDNIHLTRFLRVLANFLVLC
CLAGSGYLIYFVVRRSQKFALDGLENHSWWERNEVNMVMSLLGMFCPMLFDIISTLENYH
PRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNITLWEASFYNVTGNST
APPAVHPADVPRGPCWETMVGQEFVRLIISDTMTTYATLLIGDFLRAVLVRFLNHCWCWD
LEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCN
VPQERVFKASRSNNFYMAMLLVILFLSTLPAMYTIVTIPPSFDCGPFSGKNRMFDVIHET
LESDFPAWFGKVFNYASNPGLILPFMLLMVLAIYYLQSTSKSYKEANIELKKKLQTQSEE
NKRKNKQAALKAAMDLEEARRAASEAAEKQKNNKALQQDHESGKEHRCRAQKSHHGKSGH
KSPTGRAQERTTTRTPSSGSHRHSNNEASRYLPGFPQQSDLKIHREPRLQRH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaacaaactgatcactaccgaggatgacattcacattggactggatacaggt
gatgaagaccaaatttgcactataccagaagaatatgagcgaaagaaaacagcaaaaaag
aagcaggatagtaaaagagagggaaagaagggaaatcgaaagaagaaaaaacatgccgcc
gagactcaagaggagttgatggacagaccagagaggaaagaaaaaggcatgaggaagaaa
ggaaacaatgataaaaataataccgcaaaggagattgagagggaagacaaaaaaaagatg
gcaagggagaagaaccttaaaaataagcaaagagaaaaggtgccgatggaaagcggagct
gaggatgaacatttcaagaggaaacacaaacacgatagtgccccgaatgaagaaagaaaa
gagaatgttcgtaaacgtgagaaggagaagaaacaggaagtaaagatgaaaaagcacaca
aaagtaattgaaacaagttcagagcaggagacaagtgaagaagaggacaaggaggacagc
aatgacgaagagttgaggccagagtctctgacagctgaggagctccaagagctaaaagag
gaagtggacgagaggaagaaattgatccagggtctcagaggaaagccatggtcgatgaaa
aagaagctgttaaccttacgggagtctcaggagtttgtggagaactacgagggggctttg
ggcaaagggaaaggcagaaggctctacgcatacaaggtcatgatgaccaagaaatggatg
aagtttcaacgagattttgaaaacttcagaactgcttgcatcccatgggagatgaaaatc
aaagagattgaaagtcactttggctcttctgttgcttcttacttcatcttcctgaggtgg
atgtatggtatcaacatgatcttgtttgggctcacttttggcttggtcatggtgccagag
gcattaatgggtcggccctacggcagcatctcgagaaagactgtgccgagggctgaggaa
gggagcgccatggactttgctgtcttgtgggacttcgggggttacgcccaatactctgtc
ctcttctacggttattacaatgaccagcgtgccattggctggctcaagtttcgcatgcct
ttgtcgtatttcctggttggagtaggaacagtggcctacagctacatggtggtcattaga
acgatggcccgtaattcaaatgagactggtgtcggagatgataacagctttaatttcagc
tggaaaatgttcacaagctgggactacctgatagggaacgctgaaacagcagataataaa
tttgcctcaatcaccaccagcttcaaggaagcaatcttagaagagcaagagagccataag
gatgacaacatccatctgacccgcttcctgcgagtgctggccaatttcctggtgttgtgc
tgcctagcaggaagtggatacctcatttactttgttgtgcggcgatctcagaagtttgct
ctggacggattagaaaaccattcttggtgggaaaggaatgaggtaaatatggttatgtca
ttactggggatgttttgtcccatgctgtttgacatcattagcaccctggagaactaccac
ccccgagtcgccctgcagtggcagctgggccgcatctttgccctcttcttggggaacctc
tacacattcatcatcgcactcatggatgagatcaacctgaaaagggaagaggaaaaaata
gtcaagtttaatataacactgtgggaagcaagtttttacaacgtcacaggaaatagcaca
gcgccacctgctgttcatcctgctgatgtgccccgtgggccctgctgggagaccatggtg
gggcaggagtttgtgcggctcatcatatctgacaccatgacaacctacgccacactgctc
attggtgattttcttagagctgtgcttgttcgttttctcaaccactgctggtgctgggac
ttggaggccggctttccgtcatactctgagtttgatgttagcgggaatgtgctcggcttg
atcttcaatcaaggaatgatctggatgggtgccttttatgctccctgcctgcctgcccta
aacgtcctccgcctccacgtgtccatgtaccttcagtgctgggccgtcatgtgctgtaat
gtgccgcaggaaagagtcttcaaggcctctcgctccaacaacttctacatggccatgtta
ctggtcatcctcttcctctccaccctacctgcaatgtacaccattgtcacaatccctccg
tcttttgattgcggaccattcagtgggaagaatcgtatgtttgatgtcatccatgagact
ttggagtcagacttcccagcctggtttggaaaagtgttcaactatgcctcaaatcctgga
ctgatcctaccctttatgttgttgatggtgctggcaatttattacctgcagtccacatcc
aaaagctacaaagaagcaaatattgaactgaagaaaaaactacagacgcaaagtgaagaa
aacaagcgaaagaacaagcaagctgcgttgaaggccgcaatggatttggaagaggccaga
agagctgcatccgaggctgcagaaaaacaaaagaacaacaaagctttgcagcaagaccat
gaaagtgggaaagaacaccgttgtagagctcaaaaatcacatcatggcaaaagtggacat
aaatctcccacaggaagagcccaagaacgtacaacgaccagaactcctagctccgggagt
catcgccatagcaacaatgaagcttctcggtacctgcctggtttccctcaacaaagtgat
ctgaagatacacagggagccaaggttacagcgacactga
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