Shewanella sediminis: Ssed_1920
Help
Entry
Ssed_1920 CDS
T00596
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sse
Shewanella sediminis
Pathway
sse00470
D-Amino acid metabolism
sse00550
Peptidoglycan biosynthesis
sse01100
Metabolic pathways
sse01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ssed_1920
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ssed_1920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ssed_1920
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_1920
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Ssed_1920
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Precursor biosynthesis
Amino acid ligase
Ssed_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
ABV36531
UniProt:
A8FUK8
LinkDB
All DBs
Position
complement(2309461..2310462)
Genome browser
AA seq
333 aa
AA seq
DB search
MSQTNLLLLCGGGGDEHAISLLSANFFETSLADITGFNVLRVELDADGHYHTKDGDICEL
TNRKQIRFEDESKRPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDSEASRNCFNK
VTAKMWFSALGIPNTPYIFLNEFNDDAISQTEQALETWGSVFIKAASQGSSVGCYRVDSI
DELASSLKEAFSYSPYVVVEKTIHARELEVAAYELDGEIVATKPGEIICASNTFYTFDEK
YAADSQAETKVEADISDELSREIREYAVKVFKGMKLSHLSRIDFFLTDENEILLNEINTF
PGLTPISMFPKMLQNHGDDFTEYLYSNIKSQLI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacgaatctacttttgttatgtggtggtggcggagatgaacacgcaatttcc
ctgctatcggcaaacttttttgaaacttcactcgccgacattactgggtttaatgtttta
cgggttgagctggatgccgatggccattatcacaccaaagatggcgacatttgcgaactg
actaaccgaaagcagataagattcgaagatgaaagcaagcgcccctggcccgttgattac
gtgatcccttgcattcatggttatcccggagaaaccggtgatattcaatcctattttgaa
ctgatcaacctgccctattttggctgtgattcagaagccagcagaaactgttttaataag
gtcacggctaagatgtggttcagtgcacttggcattcctaacaccccctatatctttctt
aacgaatttaatgacgatgcgatatctcaaactgagcaggcattagagacctggggctct
gtgtttatcaaagctgcttctcaaggttcatctgtgggttgttatcgtgtcgacagcatc
gatgagctggcgagctcattgaaggaagccttttcctactcgccttatgttgtggtcgaa
aaaaccattcacgctcgcgagctcgaagtcgctgcctatgagctggacggtgagatcgtt
gcaactaagccgggcgaaatcatctgtgccagtaataccttttataccttcgatgagaaa
tatgccgcagacagtcaggcagagaccaaggtcgaagccgatatcagtgatgaattgagc
cgagagatccgcgaatatgccgttaaggtatttaaggggatgaaactcagccatctctcc
cgcatcgacttctttctgaccgatgagaatgaaattctcctcaacgaaattaataccttc
ccgggacttacacctatttcgatgttccctaagatgctgcaaaatcatggtgatgatttt
acagaatacttatattcaaatattaagtcacaactgatctag
DBGET
integrated database retrieval system