Shewanella sediminis: Ssed_3485
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Entry
Ssed_3485 CDS
T00596
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sse
Shewanella sediminis
Pathway
sse00550
Peptidoglycan biosynthesis
sse01100
Metabolic pathways
sse01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ssed_3485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ssed_3485
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_3485
Enzymes [BR:
sse01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ssed_3485
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Ssed_3485
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABV38089
UniProt:
A8FZ16
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Position
4242522..4244378
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AA seq
618 aa
AA seq
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MAPKKRITMHDHAAEASLFKRRALFTFACVVILLGILLTNLYHLQILSYTDYETRSNDNR
IRVVPVAPSRGLIFDRHGKLLAENQPFFSLELIPEKVKDVPAVLAELSTLIPLSADEQED
FQKSLKYHRRFKPLTLKNRLSESEVALFSVNRHRFPGISVVAGLKRHYPYNGMMTHALGY
VGRINDRDRAALQRNDLWKNYAATKYIGKQGIEKFYENLLHGQPGHLEEEVNNRGRTIRT
LKSVPPVPGQDIYLTLDLQLQEKAVELLNGRRGSVVAIDPRDGGILAMVSSPTYDPNLFV
HGISTKAYNELLNSRSRPLINRATQGQYAPASTVKPHIALLGLEDKTITEKTRVWDPGFW
QIPGVERKYRDWKRWGHGWVDVNSALVGSCDTYFYELAYKTGVDKIANFMQPFGFGERTG
VDIFEESAGIMPSKDWKRMRYNQPWYIGDTISVGIGQGYWTTTPLQLANAAAIMANKGKR
FVPHLLKSIKDSTAKINSPVDEMAPIELKDPKNWEIINNAMRDTAHKKRFKDATYTAAMK
TGTAQVINVAADAKYDADNIDEHLRDNALVIAYAPFENPKVVLAVVLENAGWGGANAGPV
ARALLDEYMLRDSWESIQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtggcgccaaagaagcggataactatgcatgaccacgcagcggaggcatcgcttttcaaa
cgaagagcattgtttacattcgcttgcgtcgtcattttgttgggaatattactgacaaac
ctctatcacctgcaaatactctcttataccgactacgaaactcgttctaatgataaccgt
atcagagttgtacctgtcgcgccgagtcgaggcctgatattcgaccgccatggcaagctc
ttagctgaaaatcagcctttcttttccttagaactcatccctgagaaagtaaaagatgtc
cccgcagtactggctgaattaagtacgcttatcccactgtctgccgatgagcaggaagat
ttccaaaagtcactgaaatatcacagacgttttaagccgttaacgctaaagaaccgcctg
agcgaaagtgaagtcgcactgttcagcgtcaatcgtcatcgatttccaggtatatctgtg
gttgccggactaaaacgtcactacccttacaacggaatgatgacccatgcattaggttat
gtaggaagaattaacgaccgagatcgagcagcattacaacgtaatgacctatggaaaaat
tacgcagcaaccaaatacataggtaagcaaggtatcgagaagttctatgaaaatctgctt
catggtcagccaggtcatttagaggaagaggtcaataatcgaggccgcacaattcgaact
ctaaaatcagttccgccggtaccgggtcaggatatctacctgactctagacttacagcta
caagaaaaagccgttgaattgttaaatggacgcaggggctctgtcgtcgctatcgaccct
cgtgatggcggaatattggctatggtgtcgagtcctacctatgacccgaatctttttgta
cacgggatcagtaccaaggcatacaatgagctactcaactctcgctcccgccctctgatt
aaccgagcgacccaaggacagtatgcaccagcttcgacagttaagccccatatcgcatta
ctcgggttggaagataaaacaatcacagaaaagacccgagtctgggaccccggcttctgg
cagatccccggcgtcgagagaaagtacagagactggaaacgctggggacatggttgggta
gatgtaaatagcgccttagtcggctcttgcgatacctacttttatgagcttgcctataaa
acaggtgtagataagattgctaacttcatgcaaccctttggttttggtgagcgaaccggc
gtcgacatttttgaagagtcggcgggcatcatgccatcgaaagattggaagcgcatgagg
tacaaccaaccttggtatatcggagataccatctctgtaggtatcggtcagggctactgg
accacaacaccattacaactcgccaacgctgcagcgattatggcgaacaaaggcaaacgc
tttgtgccacatctgttgaaatcaataaaagacagcacggcaaaaattaactctcccgtc
gatgagatggcaccgattgagcttaaagaccctaaaaactgggagatcatcaataatgcg
atgagagatacggctcataagaaacgattcaaagatgcgacctatactgccgcgatgaaa
accggtacggctcaagttatcaatgtggccgcagatgcaaaatatgatgcagataatatc
gatgaacacttgcgagataacgcattagtcattgcctatgccccctttgaaaatcccaag
gttgtattggccgtggtacttgaaaatgcgggctggggtggcgctaatgcggggccagtt
gccagagctctgctggatgaatatatgttacgagatagctgggagtcgattcaatga
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