Shewanella sedimentimangrovi: JYB85_09705
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Entry
JYB85_09705 CDS
T07846
Name
(GenBank) DegT/DnrJ/EryC1/StrS family aminotransferase
KO
K19715
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:
2.6.1.109
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssem01005
]
JYB85_09705
Enzymes [BR:
ssem01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.109 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
JYB85_09705
Lipopolysaccharide biosynthesis proteins [BR:
ssem01005
]
Lipid A
JYB85_09705
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QSX35668
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Position
2238601..2239788
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AA seq
395 aa
AA seq
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MPGFEIFGPEEKQEVADVMENGFTFRYNFDGMRNGRWKSREMEELLCEKLNVKHAHLLSS
GTCALTTALMAAGIGAGDEVIVPPFTFVASIEAIMMAGAVPVFAEIDETLCLSPEGIRAA
ITPRTKAVNFVHMCGSMGHMDEIKAICDEHNLILLEDACQAIGASYKGKFLGSIGHVGCF
SFDSVKTISCGEGGAVITNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGLNFRISEMN
AALGLAQLRKLDTILDIQRTNKKMIKDAMAEIPEVSFRVIPDPEGDNAGFLSFMLPSEER
AQEINKALAANGVDGCFYWYVNNWHYLKNWHHIHNLQAPAALPISLVADKPDYTQVSVPK
SDAIMSRTISMLIKLSWTEEQIQQRIANIKKAFAQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttttgaaatatttggtcctgaagagaagcaggaagtcgcagatgtgatggag
aacggttttaccttccgttacaactttgatggcatgcgcaatggtcgttggaagagccgt
gaaatggaagagctgctgtgtgagaagctcaatgtcaaacacgcccatctgctctccagc
ggtacctgtgccctgaccacggccctgatggccgccggcattggtgccggtgatgaagtt
atcgttcccccctttacctttgtggcctccatcgaagccatcatgatggccggtgccgtc
cccgtgttcgccgaaatcgacgagaccctgtgtctgtcccccgaaggcatccgcgccgcc
attaccccacgcaccaaggccgttaacttcgtgcacatgtgcggttccatgggtcatatg
gacgaaatcaaggccatctgcgatgagcacaacctgatcctgctggaagacgcctgtcag
gccataggtgccagctacaagggcaagttcctcggctctatcggccatgtgggttgcttc
tccttcgactcggtgaaaaccatttcctgcggtgaaggcggagcggtaatcaccaacgat
gaaaccatctacaaccacagccacatgttctctgaccacggtcacgaccacataggcaac
gaccgcggcgccgaaaagcaccccatcatgggtctgaacttccgcatcagcgaaatgaac
gccgccctgggtctggcacagctgcgtaagctggacaccattttggacatccagcgcacc
aacaagaagatgatcaaggacgccatggcggaaatccccgaggtcagcttccgcgtgatc
ccggaccctgaaggcgacaacgccggcttcctcagctttatgctgccaagtgaagaacgt
gcccaggaaatcaacaaggccctggccgccaatggcgtcgacggttgcttctactggtac
gtcaacaactggcactacctgaaaaactggcaccacatccacaatctgcaggccccagcc
gccctgcccatcagcctggtggccgacaaacccgattacacccaggtatctgtgcccaag
tccgatgccatcatgagccggaccatctccatgctgatcaaactcagctggaccgaagaa
cagatccagcaacgtatagccaacatcaagaaggcatttgcccaataa
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