Solea senegalensis (Senegalese sole): 122758260
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Entry
122758260 CDS
T07721
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122758260 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122758260 (prpf4)
Spliceosome [BR:
ssen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122758260 (prpf4)
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
eIF2A
WD40_like
Motif
Other DBs
NCBI-GeneID:
122758260
NCBI-ProteinID:
XP_043868221
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Position
LG21:complement(17473094..17477572)
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AA seq
508 aa
AA seq
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MSDDEDGPPVVKRSRVYYGSLEEKERERLVTGGSMSSRSSAVKAGIDAGNINISSGETME
MEERVNERQQEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLR
SVLSVVGPDALKKSRKDEERAKRSQEECQQTWYHEGPTSLKEARLWLAKYSLPRAVERLE
AARAQKEVAEATKAMRQQEQHKSLRSLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGL
CKLWSVPDCSLIRTLRGHNTNVGAIVFRPQAGVSLDHSDVSLASCATDGSVKLWNLESDE
PVADIEGHDERVSRVTWHPSGRFLGTTCYDKSWRLWDLEVQEEILHQEGHSKGVHDLHFH
PDGSLTATGGLDAFARVWDLRTGRCVVFLEGHLKEIYSVNFSPNGYHLATGSGDNTCKVW
DLRNRRCLYTIPAHQNLVSAVRFQPTDGHFLLSGAYDNTAKIWTHPGWTPLKTLAGHEGK
VMGVDVSPDGKLIATSSYDRTFKLWLSE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggacgggcctccggtcgtgaagaggagccgtgtttactatggaagc
ctggaagaaaaagagcgtgagcgcctggtcacagggggcagcatgtcatcaagaagtagc
gcggtgaaggcggggattgatgcagggaacatcaacatatcctcaggagagactatggag
atggaggagcgggtcaacgagcgtcagcaggaggcgcttgctgcgtttgagcggcggcgg
cgagcacgacaaatcacggtctccactgacgacgccgaggtcaaggcaggcctccgtgcc
cttggcgaaccaatcacattgttcggagagggaccagctgatcgtcgagagaggctgcga
agtgtcctctctgtggtcggtccagatgctctgaaaaagtccaggaaagacgaagaacga
gccaagaggtcacaggaagagtgccagcaaacatggtaccacgaaggccccacctccctg
aaggaagctcgcctctggttggccaaatactctctgccacgggcagtggagcgtctggag
gctgcacgtgctcagaaggaggttgccgaggcaaccaaggcgatgcggcaacaagagcag
cacaagagcctgaggagtctgaacaacttctgcagtcagatcggagatgaccgaccaatc
agcttctgccacttcagccctgactccaaaatgctggccacagcttcctggagtggtctg
tgtaagctgtggtccgtccccgactgcagtctgatccgtacactcagaggacacaacacc
aacgtcggtgccatcgtcttccgtcctcaggccggagtctctctggaccactcggacgtc
agcctggcgtcgtgtgcaactgatgggtcagtgaaactgtggaacctggagagtgacgag
ccggtggctgacattgagggtcacgatgagcgcgtgtcacgggtaacctggcatccatct
ggaaggttcctgggaacaacctgttatgataaatcgtggcgtctgtgggacctcgaggtt
caggaggaaattctacatcaggaaggtcacagcaaaggagtccacgacctgcacttccac
ccagacggttcactgacagctactggaggcctggatgcatttgctcgtgtttgggatctt
cgaactggacgctgtgtcgttttccttgagggacatttgaaggagatttacagcgtgaac
ttctctcccaacgggtatcacttggcaacaggaagtggtgacaacacctgtaaggtttgg
gacttgagaaacaggaggtgtctgtacacaattcccgcccaccagaacctggtgtctgct
gtccgctttcaacccactgacggtcacttcctgttatccggggcttacgacaacacggcc
aaaatctggactcaccctgggtggacgcctctgaagactctcgctggacatgaggggaag
gtgatgggcgtcgacgtgtcacccgacgggaaactgattgcaaccagttcgtacgaccga
accttcaaactgtggctgtctgagtga
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