Solea senegalensis (Senegalese sole): 122758446
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Entry
122758446 CDS
T07721
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
KO
K04490
transcription factor 7-like 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04310
Wnt signaling pathway
ssen04520
Adherens junction
ssen04916
Melanogenesis
ssen05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122758446
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122758446
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
122758446
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122758446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122758446
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
122758446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
DUF2582
Motif
Other DBs
NCBI-GeneID:
122758446
NCBI-ProteinID:
XP_043868574
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All DBs
Position
LG21:1587864..1599269
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AA seq
582 aa
AA seq
DB search
MPQLSGDDLGANDELIPFKDEGELEEKRSVSAHRDLDDVKSSLVNESETISSSDSETDRR
PKPRPDLENRARHSQLFEEALRRQQDAGLFQPSPYMGYPFFMIPDLGNLCNPYLTNGALA
SSAQMYLPFQWPVLDVPGRSAAVRDAVSPAQLSNSVPVVQRPPHMSHLHPLLSYSPEAFS
PQRASPGFSPDAGVSRTLPTPCYPMSPGGMTQIPHPLGWLQGQSMYPIAGGFSPVALSSL
MSGGFSPRLVPTPQSSIPHPAIVSTVVKQEPGGGCSSSQHENVKCDAAQEKEDDKRNYVK
KPLNAFMLYMREERPKVVAQCKVKESATINQILGQRWHSLSKDDQSKYYDLARKERLLHS
KLYPGWSARENYGKKKKRKRTKSETEQMAADDLSPQLKRPCVSTAADETPHTHPHTPLAH
PPPQTAHAHSRPHTVSHLTHTHLSQASPASSLDSPATPTTSLASPGAPAPTHTDHAHSSF
SHSGHMSPYGEQLQPLPLTTKPHRPAHLLIHRAATVTPGPSTPSSSSSDTPALSPLTAAC
RSPLPPPLLSQPFLAPPPTSTHQSAASSHGALAQLLRRAHQP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgagcggagacgacctgggagcgaacgacgagctcatcccgttcaaagac
gagggcgagctggaggagaagcggagcgtgtccgcgcaccgagacctggacgacgtcaag
tcttctctggtcaacgagtccgagaccatcagcagctccgactccgagacagacagacgt
cccaaaccccgcccagacctggagaacagggccagacacagtcagctgtttgaagaagct
ctgaggaggcagcaggacgccggtctcttccagccctcgccgtacatgggttatcctttc
ttcatgatcccagacctcgggaacctctgtaatccctacctcaccaatggagccctcgca
tcaagtgcccagatgtatctgccgtttcagtggcctgtcctggacgtcccgggacgatcg
gcagccgtcagagacgctgtgtctcctgcacagctgtctaacagcgtcccagtggtgcag
cgtcctcctcacatgtctcacctgcaccctctgctgtcctacagcccagaggccttctct
cctcagagagcctcacctggattctctcctgacgcaggtgtgtcaaggactcttcccact
ccctgctaccccatgtctcctggaggcatgactcagattccacacccactcggatggctg
cagggacagtccatgtatcccattgcaggggggttttcacctgttgctctgtcgagtctg
atgtcaggtggtttctctccacgcttggttcccacgcctcagtcgtccattcctcacccg
gccatcgtctccactgtggtgaagcaggagccgggcggcggctgcagcagcagtcagcac
gagaacgtaaagtgtgacgctgctcaggagaaagaagacgataagagaaactacgtgaag
aaaccgctcaacgccttcatgttgtacatgagggaggagcggcctaaggtggtcgctcag
tgcaaagtgaaggagagcgccaccatcaaccagatactgggacagcggtggcactctctg
tccaaggacgatcagtccaaatattacgacctggctcgtaaagaaagactcctgcactct
aagctgtacccgggctggtctgccagagaaaactacggtaaaaagaagaagaggaagagg
acgaagagtgagacggagcagatggcagcagacgatttgtccccacagctgaagagaccg
tgtgtctccaccgcggccgacgagacaccgcacacgcacccccacacgccgctcgcacac
cctcccccacagactgcacacgcccacagccgccctcacaccgtctcccacctgacacac
acacacctgtcccaggcgagccccgcctcctcgctggactccccggccacgcccaccaca
tccctggcctcgcccggcgctccagcaccgacgcacaccgaccacgcgcactcgtccttc
agccacagcggacacatgtcgccgtacggcgagcagcttcagccgctacccctcaccacc
aaaccccaccggcccgcacatctgctgatccaccgcgctgccaccgtcaccccgggaccc
tccacgccgtcgtcctcgtcctccgacacgcccgccctgtccccgctcaccgctgcgtgc
aggagtcctctccctcctcctctcctctctcagccgttcctggccccgcctcctacctcc
actcaccaatcagcagcgagctctcacggtgccttagctcagctgctcagacgagcccat
cagccatga
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