Solea senegalensis (Senegalese sole): 122766312
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Entry
122766312 CDS
T07721
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122766312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122766312
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122766312
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122766312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
HS1_rep
Motif
Other DBs
NCBI-GeneID:
122766312
NCBI-ProteinID:
XP_043877009
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All DBs
Position
LG3:2048938..2059470
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AA seq
544 aa
AA seq
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MFGANRKKFMEGGVESDYTDDSSLYYSQQSMFPPHRSDKDMLVSSSASSSGQLSQLGASL
YGPQSALGFPMRGLNSSAAPQLSRSGLNQSASQLSSHASSANTGSLHTPPSPSRGILPMS
SRSVLNHSQQVGGPTAQSAGMGGVGERGGGGGRSGSSMGSPSRSSPSIIGMPKQQQARQP
FTINSMSGFGVNRNPGFSLNNSLSNNIFNGTVFPCLRSDGSENVTGLDLSDFPALADRSR
KDGGSNPAPLPNPLAGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTSE
DSKTNLNSSGKPNSTSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFG
MIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFH
VPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEER
VWITRAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPSTFNYNPA
QQAF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaacaggaagaagttcatggaggggggagtggagagcgactacacggac
gattccagcctctactacagccagcagtctatgttcccccctcaccgctcagacaaagat
atgctggtgtcttcctccgcctcctcatcgggtcaactgtcacagctgggagccagctta
tatggtccgcagagtgcgttggggtttcccatgcgtggtctcaacagcagcgcggcaccg
cagttaagtcgaagtggcctgaaccagtcagcgagccagctctccagtcatgccagttca
gccaacactggttcactgcacacgcctccctcgccgagcagggggattttgccgatgagc
agccggagcgtgctcaaccacagccagcaggtgggaggtccgacggcccagtcggcggga
atgggcggagttggcgagagagggggaggaggagggaggagcggcagcagcatggggagt
ccaagccggtcgtcaccaagcattatcgggatgcccaaacaacaacaagcacggcagccg
ttcacgattaacagtatgtcggggtttggtgtgaacaggaatcccggcttcagcttaaac
aactcattatccaacaacatctttaacggaacagtttttccgtgcttgcgctcagacggc
agtgagaatgtgacagggctggatttgtcggatttcccggcattagctgacaggagtcgg
aaagacggcggttcgaatcccgccccgttgcccaacccgctggccggtcgggctccttac
gttggcatggtaacaaagccgtccagtgaacagtcgcaagacttttccatccataatgaa
gatttcccagctctcccagggccaaactaccaaacaaaagaccccaccagcaccagcgaa
gacagcaaaacgaatctgaactcatcaggaaagcccaactcaacctcagacggtccaaag
ttccccggcgataaaagttcggcgcccagcaacaacaaccagcagaagaaagggatccag
gtgcttcccgacggccgtgtgaccaacatcccagttggcatggtaacggaccagtttgga
atgattggcttgctgacgttcatccgggcggcagagacggaccctggcatggtccacctg
gcgctgggctcagacctcacaacacttggcctcaacctcaactcaccagagaatctctat
cctaagtttgcgtctccctgggcgtcgtcgccgtgtcgaccgcaggacattgatttccac
gttccctcagagtatttaaccaacattcacataagggacaagttagcagctatcaagttg
tctcgatatggtgaagatctgctgttttatctgtactatatgaacggaggagacctacta
caactactggctgcagtagaactctttaacagggactggcggtaccacaaagaggagcgg
gtttggatcaccagagcgccgggtatggagcccacgctgaagaccaacgcctacgagaga
gggacctactacttctttgactgcctcaactggaggaaagtggccaaggagttccatctg
gagtacgagaaactagaagagcggccccacgttccctccacgttcaactacaatcctgcc
cagcaggccttctga
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