Solea senegalensis (Senegalese sole): 122768077
Help
Entry
122768077 CDS
T07721
Name
(RefSeq) green-sensitive opsin
KO
K04250
rhodopsin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122768077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssen04030
]
122768077
G protein-coupled receptors [BR:
ssen04030
]
Rhodopsin family
Vision
Opsin
122768077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
122768077
NCBI-ProteinID:
XP_043879709
LinkDB
All DBs
Position
LG4:complement(23895108..23901695)
Genome browser
AA seq
345 aa
AA seq
DB search
MENGTEGKNFYIPMNNRTGLVRSPYEYPQFYLGEPILFKLLAVYMFFLISTGLPINGLTL
LVTAQNKKLRQPLNFILVNLAVAGLIMVCFGFTITFITSIYGYFVFGPMGCAIEGFMATL
GGQVALWSLVVLAVERYIVVCKPMGSFKFTGTHAGVGVGFTWIMALACAVPPLVGWSRYI
PEGLQCSCGPDYYTLAPGFNNESYVMYMFICHFCFPVGTIFFTYGSLVLTVKAAAAQQQD
SASTQKAEKEVTRMCFLMVLGFLVAWTPYASFAAWIFFNKGAAFSATAMAIPAFFSKSSA
IFNPVIYVLMNKQFRSCMLSAVGMGNLVEDETSVSTSKTEVSSVS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggcacagagggcaagaacttctacatccccatgaacaaccggacggggctt
gtgaggtctccttatgaatatccacagttctacctgggggagccaattttattcaaactt
cttgctgtctacatgttcttcctgatctccactggcttacccatcaacggtctcactctg
ttggtcacagctcagaacaagaagctacgacagcctctcaacttcatcctcgtcaacctg
gctgtggccggcctcatcatggtctgctttggcttcaccatcacgttcataacgtcaatc
tatggctattttgtctttggaccaatgggttgcgccattgagggattcatggccacgctg
ggaggtcaagttgctctctggtctctggtcgtcctggctgtggagcgatacattgtcgtc
tgcaaaccaatgggaagcttcaagttcactggaactcatgcaggagtgggagttggtttc
acctggatcatggctctcgcttgtgccgtccctccactggttggctggtccaggtatatt
cctgagggtctccagtgctcttgtggaccagactactacactttggccccaggcttcaac
aacgagtcatatgtcatgtacatgttcatctgccacttctgcttcccagttggaaccatc
ttttttacatatgggagccttgtgctgacagtcaaagctgctgcagctcagcagcaagac
tcagcctccacgcagaaagccgagaaggaagtgacacgcatgtgtttcctgatggtgcta
ggcttccttgtggcctggactccatacgcaagctttgcggcatggattttcttcaacaag
ggtgctgccttctcagccacagccatggccatccctgccttcttctcaaagagctcagct
atattcaatcctgttatctatgtgctgatgaacaaacagtttcgtagctgcatgctctct
gcagttggcatgggcaatttggttgaagatgagacctcagtatcgaccagcaagacagaa
gtgtcctcagtctcctaa
DBGET
integrated database retrieval system