KEGG   Solea senegalensis (Senegalese sole): 122768232
Entry
122768232         CDS       T07721                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122768232 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssen01009]
    122768232 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssen03021]
    122768232 (ell2)
Protein phosphatases and associated proteins [BR:ssen01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122768232 (ell2)
Transcription machinery [BR:ssen03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122768232 (ell2)
    Little elongation complex (LEC)
     122768232 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 122768232
NCBI-ProteinID: XP_043880002
LinkDB
Position
LG4:3542909..3567874
AA seq 695 aa
MLQPHRDDGGGLLKMAALSEDGRYGLNCGQQSADRVTVLHVKLTETALRAIESYQSCVNV
PSSQPTIQFKGLQGRIKIPKTNSSSDTFNIFDFYLSNVGKDNPQGSFECIRQYAPSSGAS
HLALLATVQDKVTVCATNDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKQVHIRKPA
LSTPEVVPERKRSTPINPANTIRKCLSNNPVSQRPFRDRIIHLLALRSYKKLEVLARLQR
DGINQKDRNSLGSTLQQVANLNPKDNTYSLKDFIYRDVQRDWPGYSEDDKSQVDRILARK
LGLPTETLSSSSPPKDAVPTSPQKRQPDFDFIDPLAPKKARISHLSNRGPAASSSSSSDR
HEEEGSPSSKSSSLPSNVTSGPPTHLPISSHPPALSHQQPSPASNSHSPSTPEGCGTQDL
PTDQSSSCRDPSTSPFSSDRTLQDRFGHPVPIPRPASSPSPPPPPPRTSLTVTSTVITSP
PLSSSTNKKVKKKSKKHKDKDREKEKGKRMERANGTPPPPPPPPPPPPPSVVEMADESRK
AKNRHSAEEERRGVVDKHPHKHQDKDKPVQSTEFSSAIEMPDYIVKYTSLVSMDQRQSYK
DDFNAEYDEYRQLHARVEGITRRFTQLDTQCRKLSPGTKEYQKVQEEVMKEYKKMKQHSP
NYHEEKQRCEYLHNKLAHIKRLIADFDQRRAQAWC
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgctccagcctcacagggacgatggtggagggctgctaaagatggcggcgctgtctgag
gatgggaggtacggattaaattgtggccaacagagcgccgacagagtcaccgtgctccac
gtcaaattgaccgagacggcgttgagagcgatagagagctaccaaagctgtgtgaacgta
ccttcctcgcagccaacaatacaatttaagggacttcaagggcgcattaaaattcccaag
accaattcctcgtcagacaccttcaacatttttgatttctacctgtccaatgtgggcaag
gacaaccctcagggaagctttgagtgcatccgtcagtatgcaccaagctcaggggcctca
cacctggcattattggcaacagtacaggacaaggtcacggtgtgcgccacaaatgactcc
tatcaggtgacccgggaacgcatgacccaagccgcagaggacacacgtgaacgtgggacc
aaagtcatcaaacctgggggccagtacagaggaaaacaagtccatatacgtaagcctgca
ctatcaaccccagaagtggtcccggagcgcaaacgctccacacccattaacccagccaac
acgattcgcaagtgcctttcaaataaccccgtgtcccagcggccgtttcgggaccgcatc
atccacctgctggcgctgaggtcctacaagaaactggaagtgctcgcccgtttgcagcgg
gatggtatcaatcagaaggaccggaactctttagggagtaccttgcaacaggttgccaac
ctgaacccaaaggacaacacatattctttaaaggactttatttatcgtgatgtccagcga
gactggcctggttattctgaagatgacaagtcccaggttgaccggatcctagctcgcaaa
ttaggtcttcctactgagacactttcatcaagtagtcctcccaaagacgctgtccccact
tccccccagaaacgccagccagactttgacttcattgatccactggcgcccaagaaagcc
cgcatctcgcacctcagcaatcgagggccagctgcatcttcatcctcctcctctgaccgc
catgaggaagagggcagccccagctctaaaagctcgtccctaccctctaatgtcacgtcg
ggccctcccacccatctccccatttcctctcaccctccagcactctctcaccagcagccc
agccccgcctccaactcccactcacccagcaccccggagggctgtggcacccaggatctg
cccacagatcagagctcctcctgcagagacccttcaacaagccccttctcctctgacagg
accctgcaagaccgctttgggcacccagtccccattcctagaccagcctcctcccccagc
cctcctcctcctcctcctcgcacctcactgacagtgacctccacggtcatcaccagcccg
cctttgtccagcagcactaacaagaaggtcaaaaagaaatccaagaagcacaaggacaag
gatcgagaaaaggagaaagggaaacgtatggaaagagccaatggaacgcctcctcctcct
cctcctcctccacctcctcctcctcccagtgtggtggagatggcggatgagagtcgtaaa
gccaaaaacaggcatagtgctgaggaggagaggagaggtgtcgtcgacaaacatcctcac
aaacatcaagataaagacaagccagtccagtccactgaattttcctccgcgattgagatg
ccagactacatagtgaagtatacatcactggtgtccatggaccagcggcagagctacaag
gacgactttaacgcagagtatgatgagtaccgtcagctgcacgcccgtgtggagggcatc
acccgccgcttcacccagctggatacccagtgccggaagctttcacctggcaccaaagag
taccagaaagtgcaggaagaggtgatgaaagagtacaagaagatgaaacaacacagcccc
aactaccacgaggagaaacaacgctgcgagtacctgcacaacaagttggcccacatcaag
cggctaatagctgattttgaccagcgcagagctcaggcctggtgctaa

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